Ctenocephalides felis (cat flea): 113386926
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Entry
113386926 CDS
T08578
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription and DNA repair factor IIH helicase subunit XPB-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03022
Basal transcription factors
cfel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113386926
09124 Replication and repair
03420 Nucleotide excision repair
113386926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfel03021
]
113386926
03400 DNA repair and recombination proteins [BR:
cfel03400
]
113386926
Enzymes [BR:
cfel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113386926
Transcription machinery [BR:
cfel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113386926
DNA repair and recombination proteins [BR:
cfel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113386926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
TniB
Motif
Other DBs
NCBI-GeneID:
113386926
NCBI-ProteinID:
XP_026480468
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MGPPKRGGYMKGGASGKYGKKKRFEDEPYSTTNIVEQDDDLPETDGVPGAATKDAEKNDE
SVVTDEYGAKDYRSQMELKPDNXSRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCR
PEHIHEYKLTAYSLYAAVSVGLQTHDIIEYLKRLSKTSIPQGILEFIQLCTLSYGKVKLV
LKHNKYFVESAHPEVLQKLLKDPVIQQCRLRATEAEGELDDDGFITQKQNVKGVTAFGSN
KVVGNNDAEKANGEGEPVPDDIANFYDKIDKDDDDEDEAMLKTVSFEVKQSQIEVIQKRC
IELEHPLLAEYDFRNDSINPDINIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGA
GKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCG
ILVTTYSMISHSQKRSWEAEQTMKWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKL
GLTATLLREDDKIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMSPEFYREYLM
CKTSKKLLLYVMNPQKFRCCQFLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPT
SQNERIQILQNFKFNPKVNTIFVSKVADTSFDLPDANVLIQISSHGGSRRQEAQRLGRIL
RAKKGAIAEEYNAFFYTLVSQDTMEMNYSRKRQRFLVNQGYSYKVITHLAGMDQEPDMLY
KTREEQGQLLQQVLAASDIDCEDERVPGEVGGAPKTGGFRRIGGLSSMSGADDAVYYEYN
KRRSENINKHPLFKKFRG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggggccacccaaacgtggtggatacatgaaaggtggagcttcaggaaaatatggcaaa
aagaaaagatttgaggatgaaccatattcgacaactaatattgtggaacaagatgatgat
ctacctgaaactgatggtgttcctggtgcagccacaaaggatgcagaaaaaaatgatgaa
tcggttgttacagatgaatacggagctaaggattacagatcacaaatggaattaaaacca
gataatngctccaggcctctttgggttgccccgaatggacatatatttttggagtcattc
tcgccggtttataagcatgcccatgattttctcatagcaatttcagaaccagtttgcagg
ccagaacatatccatgaatacaaattaacggcgtacagtctttatgctgcggtttctgtc
ggtttacaaactcacgatattatcgaatatttaaaacgtctcagcaaaacttcaatacca
caaggaatattagaattcatacaactgtgtacgttgtcttatggaaaagtgaaattagtt
cttaaacataataagtattttgttgaaagtgctcatcctgaagtgttacagaagcttttg
aaagatcctgtgattcaacagtgtagattaagggcgaccgaagcagagggtgaattagat
gacgatggttttataacacaaaaacaaaatgtaaaaggtgttactgcttttggatcgaat
aaagttgttggaaataatgatgcagagaaagcaaatggagaaggtgaacccgtacctgac
gacatcgcaaacttttatgataaaattgacaaagatgatgacgatgaagatgaagccatg
ttaaaaactgtttcatttgaggtgaagcagagtcaaattgaagtcatacaaaaacgctgt
atagaattggagcatccgctgttagcagaatacgattttagaaatgactctataaatcct
gacatcaatattgatctaaagccagcagctgttttgcgtccttatcaagaaaaaagttta
agaaagatgtttggaaatggtagagctcgatctggtgttattgttttaccttgcggtgct
ggtaaatctttagtaggtgttactgcatgttgtacagtaaggaaacgagcccttgtatta
tgcaacagtggtgtgtctgttgaacaatggaagcaacagtttaaaatgtggtcaactgcc
gatgatagcatgatttgtaggttcacgtctgaagcaaaagataagccaatgggatgcgga
attttagtcacaacttattctatgatatcgcactcgcagaaaagatcttgggaggccgag
caaaccatgaagtggttgcaagagcaagaatggggcatcatggtccttgatgaggtacac
acaattcctgctaaaatgttcagaagagtcttgaccatagtccagagtcattgcaaattg
ggtcttacagcaacattgcttcgtgaggacgacaaaattgccgatttgaattttcttatc
ggtcctaaactgtacgaggcgaattggttggaattgcaaaaacgtggattcattgctcga
gtacaatgtgctgaagtttggtgtccgatgagcccagagttttatcgagagtatctcatg
tgcaaaacatcaaaaaaattgttgctttatgtaatgaatcctcagaaattcagatgttgt
caatttttaatcaggtatcacgaacgaagaggtgataaaacgattgtcttcagtgacaat
gtttttgccctcaaacactatgctataaaaatgaataaaccttatatttatggtcctact
tcacaaaatgaaagaatacaaattctacagaattttaaattcaatccaaaagtgaacact
atatttgtgagcaaagttgctgatactagttttgatttgccggatgctaatgtgctgata
cagatttcttcacatggtggttcgaggaggcaggaagctcagagattgggtcgtatcttg
cgtgcaaagaaaggtgcgattgcagaagagtataatgcatttttctacacactcgtttcg
caagacacaatggaaatgaattattcaagaaaaagacaaagatttcttgtcaaccaaggt
tacagttacaaggttataacgcacctggctggcatggatcaagagcctgatatgctgtat
aaaacacgtgaagaacaaggacaattgttacagcaggtattagctgcctccgatattgat
tgtgaagatgaacgcgttcctggtgaagtcgggggcgctccgaaaaccggaggattcaga
agaatcggcggtttgtccagcatgtctggtgctgatgatgcagtctactatgaatataat
aaacgtcgttcggagaacataaacaaacatccgcttttcaagaagtttagaggatga
DBGET
integrated database retrieval system
