Ctenocephalides felis (cat flea): 113386968
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Entry
113386968 CDS
T08578
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113386968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfel03021
]
113386968
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113386968
Transcription machinery [BR:
cfel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113386968
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113386968
U7-dependent histone pre-mRNA processing factors
113386968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CLAMP
Motif
Other DBs
NCBI-GeneID:
113386968
NCBI-ProteinID:
XP_026480511
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MSGPAIDMFYDENSEQNIESSDNSTSVVVDWLNQASLADTTEKVTLIKKIQEYILHKEPS
LAKTYLDNILDFCADPIQDVKKAVVAFIEDLCKTDSSLFPYVCRHFLMLLCDESVQVQKR
AVQAARLVYRCALQHLSNAPQVTEQMEQSWKYLCQAKNQIITMIDNDNDGIRTNAIKCLE
SIVLLQTHRDKDSTDNNQNKQAGLADFSLDDVPLTLKVARRRKLEEEAIQIFQALLHFHN
SQHISSVNLMACMGTLCTIAKLRSQFMPKVLDALDSLNANLPPTLSSSQVNNVRKQLKLQ
LFNILKHPASIDYHDNITQLLTELGASQADITKNTPKIDKAEERRRQKRFLEQELNKHLT
IKKPRLDPEVVEEKSKAELELEELDKKRQEINATNEKFAFEKLQNIDNVVQLVMKTMLKL
PSKIPAQFIQEYSPIPNSGSIAHIKNISKLIGEKLTDLSMGPSGSLIKDTLMSRAKEDLI
INKPNVRLEENTKMDEDAQDNENSELVRLEAMKKLRENMEKERRSEINTKALKMRVKTLK
LQELTKPLMPDVKEQLLLLALRRILKTERESIQGGVMVERRKIVTTLATSFKADIRQTAL
EYILLDIKNRLDLAFSWLYEEYSILQGFMKKGINNTKIESRPDFSYEWLLCSMIKYLLNN
SDFRDKELVLTRIYLEAPCLTDETISILASMCEDENNFRISFNLLKELIIKKPPKQTKLL
NVLLCFTVHELENIREYAINTTVEVYKHSEEIMNQVDDRASTFMNYLTLDEPSNQLFGPS
LGRPIKTDVWNEELYKQCLYLYLALIPSKPVLIHDLGRVYIQTGPDVKRCILRLLEGPVR
QLGMENTELMKLVEACAKGSETLVTRVIHILTERSLPSMELVSRVRDLYHTKVSDVRFLI
PVLNGLNKDEVIDSLPKFIKLNPVVLKEVFNKLLNNQAGPTSYPSPVTPIELLVALHTID
TTSADLKFVVKATSLCLAEKEIYTQEVMSVVIQQLIDITPLPTLLMRTVLQSMTMHPRLC
SLIMNVLQRLIIKQVWTQKLVWDGFLKCCQRTKPQCLPVLLHLPLPQLSDTLTQCPDLHE
PLKQYINGLDEEKIKAIDDEIIEVIFGPDGKPGMLPFGVSVKMEPGSCVPIAVNDVLPPG
LE
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcctgcgattgatatgttttatgatgaaaattctgaacaaaacattgagagt
tcagataattccacatcagtggttgtagattggctaaaccaagcatcactagctgataca
actgaaaaagtgactttgataaaaaaaattcaagaatatatattacataaagagcccagt
ttagcaaagacttatttggataacatactagatttttgtgctgatccaatccaagatgtc
aaaaaagctgttgttgcgtttattgaagatctttgtaagacggattcatcgctctttccc
tatgtttgccggcattttttgatgttgttatgtgatgaatccgttcaagtacaaaagaga
gctgtgcaggcagccagattagtttaccgttgtgctttgcagcacttaagtaatgctcct
caagttacagaacaaatggagcaatcatggaaatatttatgccaagcaaagaatcagata
attaccatgattgataatgataatgacggaataagaacaaatgctataaaatgtttagaa
agcattgttttactccaaacacatagagataaagattcaaccgacaataatcagaataaa
caagctggactcgctgatttttcattagatgatgttccattaactttaaaagttgctaga
agacgcaagttagaagaagaagcaatacaaattttccaagcattgctgcactttcataat
tctcaacacatttcaagtgtaaatttaatggcatgtatgggaactttatgcacaatagca
aagttgcgatcgcaatttatgccaaaggttctagatgcattagatagcttgaatgcaaat
ttgccaccaacattatccagttctcaagtgaacaatgttcgcaaacaattaaaattacaa
ttgtttaatattttaaaacatccggctagcatagattatcatgataacattactcaattg
cttactgaattgggtgcttctcaagcagatattactaaaaatactcctaaaattgataaa
gctgaggaacgtcgacggcaaaagaggtttttggaacaagaattaaataaacatttaaca
atcaaaaagcctaggttggatccagaagttgtggaagagaaaagcaaagcagaattagaa
cttgaagaattagataaaaaaaggcaggaaataaatgcaactaatgaaaaatttgctttt
gaaaagttacaaaatattgacaatgttgtgcagctagttatgaaaactatgttaaaactt
ccaagtaaaataccagcgcaatttattcaagagtattctccaattcctaattctggttct
attgcacatattaaaaatatttccaaattgattggagagaaattaacagatttgagtatg
ggaccttcaggatctttgataaaagatacactaatgtcaagagcaaaagaagatttaata
attaataaaccgaatgtaaggcttgaagaaaatacaaaaatggatgaagatgcacaagat
aatgaaaatagtgagcttgtacgtttagaagctatgaagaaattaagagaaaatatggag
aaagaacgcagatcagaaataaatactaaagcacttaaaatgcgtgtgaaaactttgaaa
ttgcaagagctcacaaaaccacttatgcctgatgttaaagagcaattgttgctattagct
cttcgaagaatattgaaaactgaaagagaatctatacaaggaggtgtaatggtggaacgt
cgtaaaattgttactacattagcaacatcatttaaagcagatattcgtcaaacagcatta
gaatatatattgttagatattaaaaatagacttgacttagcattttcttggctttatgaa
gaatacagtatattacaaggatttatgaaaaagggcatcaataataccaaaattgaatca
agaccagatttcagttatgaatggttgctgtgctcaatgattaaatatttactaaataat
tcagattttagagataaagaattagtattaactcgaatatatttagaagcaccttgttta
actgatgaaacaatttctattttggctagcatgtgtgaagatgaaaataactttagaata
tcttttaatcttctaaaagaattaataataaagaaacctccaaaacaaacaaagcttttg
aatgttttattgtgttttacagttcatgaattggaaaacatacgagagtatgccattaat
acaactgtagaagtttataagcatagcgaagaaattatgaatcaagtagatgaccgagct
tcaacattcatgaactatttaacattagatgaaccatcaaatcaattatttggaccatca
ttaggcagacctattaaaacagatgtctggaatgaagaattatacaaacaatgtctgtac
ttatatctcgcactgataccatcgaagccagtgctgattcatgacttgggtcgtgtttat
atacaaactggtcctgatgttaagaggtgcattcttagattattagagggaccagttaga
caactcggcatggaaaatactgaattgatgaaattagttgaggcctgtgcaaagggatct
gaaaccttggttacaagggtgatacatattttgaccgaaagaagtttgcctagcatggaa
ctagtttctagagttcgagatctttatcacactaaagtatctgatgtccgattcttaata
ccagtattaaatggtcttaataaagacgaggttatagattctttgcccaaattcattaaa
ctaaatccagtagttttaaaggaagtttttaataagctgctgaataatcaagcaggtcct
acatcatatcctagtccagttacacctatagagttgcttgtagcgttacatacaatagac
acaactagtgcagatttaaaattcgtagtgaaagcaacaagtttgtgtttagcagagaag
gaaatttacacgcaagaagtgatgtcagtagttatacaacaattgatcgacataactcca
ttacctacattgttaatgagaacagtcctgcaatcaatgacaatgcatccaagattatgc
agtttaattatgaatgttttacaaaggctcataatcaaacaggtttggactcaaaaactt
gtatgggatggatttttgaaatgttgtcaacgaaccaaaccgcaatgtttgccagtgttg
cttcatttaccgttgccacaattatcagatacattaactcaatgccctgatctgcatgaa
cctttaaaacagtatattaatggattagatgaggagaaaataaaggcgatagacgatgaa
attattgaagttattttcggaccagatggaaagcctggtatgttaccattcggagtatct
gtaaaaatggaaccagggtcatgtgtgcccattgcagtgaacgatgtgcttccgccagga
ttggaataa
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integrated database retrieval system