KEGG   Ctenocephalides felis (cat flea): 113386968
Entry
113386968         CDS       T08578                                 
Name
(RefSeq) symplekin-like
  KO
K06100  symplekin
Organism
cfel  Ctenocephalides felis (cat flea)
Pathway
cfel03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cfel00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113386968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfel03021]
    113386968
   03019 Messenger RNA biogenesis [BR:cfel03019]
    113386968
Transcription machinery [BR:cfel03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     113386968
Messenger RNA biogenesis [BR:cfel03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     113386968
    U7-dependent histone pre-mRNA processing factors
     113386968
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N CLAMP
Other DBs
NCBI-GeneID: 113386968
NCBI-ProteinID: XP_026480511
LinkDB
Position
Unknown
AA seq 1142 aa
MSGPAIDMFYDENSEQNIESSDNSTSVVVDWLNQASLADTTEKVTLIKKIQEYILHKEPS
LAKTYLDNILDFCADPIQDVKKAVVAFIEDLCKTDSSLFPYVCRHFLMLLCDESVQVQKR
AVQAARLVYRCALQHLSNAPQVTEQMEQSWKYLCQAKNQIITMIDNDNDGIRTNAIKCLE
SIVLLQTHRDKDSTDNNQNKQAGLADFSLDDVPLTLKVARRRKLEEEAIQIFQALLHFHN
SQHISSVNLMACMGTLCTIAKLRSQFMPKVLDALDSLNANLPPTLSSSQVNNVRKQLKLQ
LFNILKHPASIDYHDNITQLLTELGASQADITKNTPKIDKAEERRRQKRFLEQELNKHLT
IKKPRLDPEVVEEKSKAELELEELDKKRQEINATNEKFAFEKLQNIDNVVQLVMKTMLKL
PSKIPAQFIQEYSPIPNSGSIAHIKNISKLIGEKLTDLSMGPSGSLIKDTLMSRAKEDLI
INKPNVRLEENTKMDEDAQDNENSELVRLEAMKKLRENMEKERRSEINTKALKMRVKTLK
LQELTKPLMPDVKEQLLLLALRRILKTERESIQGGVMVERRKIVTTLATSFKADIRQTAL
EYILLDIKNRLDLAFSWLYEEYSILQGFMKKGINNTKIESRPDFSYEWLLCSMIKYLLNN
SDFRDKELVLTRIYLEAPCLTDETISILASMCEDENNFRISFNLLKELIIKKPPKQTKLL
NVLLCFTVHELENIREYAINTTVEVYKHSEEIMNQVDDRASTFMNYLTLDEPSNQLFGPS
LGRPIKTDVWNEELYKQCLYLYLALIPSKPVLIHDLGRVYIQTGPDVKRCILRLLEGPVR
QLGMENTELMKLVEACAKGSETLVTRVIHILTERSLPSMELVSRVRDLYHTKVSDVRFLI
PVLNGLNKDEVIDSLPKFIKLNPVVLKEVFNKLLNNQAGPTSYPSPVTPIELLVALHTID
TTSADLKFVVKATSLCLAEKEIYTQEVMSVVIQQLIDITPLPTLLMRTVLQSMTMHPRLC
SLIMNVLQRLIIKQVWTQKLVWDGFLKCCQRTKPQCLPVLLHLPLPQLSDTLTQCPDLHE
PLKQYINGLDEEKIKAIDDEIIEVIFGPDGKPGMLPFGVSVKMEPGSCVPIAVNDVLPPG
LE
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgtcaggtcctgcgattgatatgttttatgatgaaaattctgaacaaaacattgagagt
tcagataattccacatcagtggttgtagattggctaaaccaagcatcactagctgataca
actgaaaaagtgactttgataaaaaaaattcaagaatatatattacataaagagcccagt
ttagcaaagacttatttggataacatactagatttttgtgctgatccaatccaagatgtc
aaaaaagctgttgttgcgtttattgaagatctttgtaagacggattcatcgctctttccc
tatgtttgccggcattttttgatgttgttatgtgatgaatccgttcaagtacaaaagaga
gctgtgcaggcagccagattagtttaccgttgtgctttgcagcacttaagtaatgctcct
caagttacagaacaaatggagcaatcatggaaatatttatgccaagcaaagaatcagata
attaccatgattgataatgataatgacggaataagaacaaatgctataaaatgtttagaa
agcattgttttactccaaacacatagagataaagattcaaccgacaataatcagaataaa
caagctggactcgctgatttttcattagatgatgttccattaactttaaaagttgctaga
agacgcaagttagaagaagaagcaatacaaattttccaagcattgctgcactttcataat
tctcaacacatttcaagtgtaaatttaatggcatgtatgggaactttatgcacaatagca
aagttgcgatcgcaatttatgccaaaggttctagatgcattagatagcttgaatgcaaat
ttgccaccaacattatccagttctcaagtgaacaatgttcgcaaacaattaaaattacaa
ttgtttaatattttaaaacatccggctagcatagattatcatgataacattactcaattg
cttactgaattgggtgcttctcaagcagatattactaaaaatactcctaaaattgataaa
gctgaggaacgtcgacggcaaaagaggtttttggaacaagaattaaataaacatttaaca
atcaaaaagcctaggttggatccagaagttgtggaagagaaaagcaaagcagaattagaa
cttgaagaattagataaaaaaaggcaggaaataaatgcaactaatgaaaaatttgctttt
gaaaagttacaaaatattgacaatgttgtgcagctagttatgaaaactatgttaaaactt
ccaagtaaaataccagcgcaatttattcaagagtattctccaattcctaattctggttct
attgcacatattaaaaatatttccaaattgattggagagaaattaacagatttgagtatg
ggaccttcaggatctttgataaaagatacactaatgtcaagagcaaaagaagatttaata
attaataaaccgaatgtaaggcttgaagaaaatacaaaaatggatgaagatgcacaagat
aatgaaaatagtgagcttgtacgtttagaagctatgaagaaattaagagaaaatatggag
aaagaacgcagatcagaaataaatactaaagcacttaaaatgcgtgtgaaaactttgaaa
ttgcaagagctcacaaaaccacttatgcctgatgttaaagagcaattgttgctattagct
cttcgaagaatattgaaaactgaaagagaatctatacaaggaggtgtaatggtggaacgt
cgtaaaattgttactacattagcaacatcatttaaagcagatattcgtcaaacagcatta
gaatatatattgttagatattaaaaatagacttgacttagcattttcttggctttatgaa
gaatacagtatattacaaggatttatgaaaaagggcatcaataataccaaaattgaatca
agaccagatttcagttatgaatggttgctgtgctcaatgattaaatatttactaaataat
tcagattttagagataaagaattagtattaactcgaatatatttagaagcaccttgttta
actgatgaaacaatttctattttggctagcatgtgtgaagatgaaaataactttagaata
tcttttaatcttctaaaagaattaataataaagaaacctccaaaacaaacaaagcttttg
aatgttttattgtgttttacagttcatgaattggaaaacatacgagagtatgccattaat
acaactgtagaagtttataagcatagcgaagaaattatgaatcaagtagatgaccgagct
tcaacattcatgaactatttaacattagatgaaccatcaaatcaattatttggaccatca
ttaggcagacctattaaaacagatgtctggaatgaagaattatacaaacaatgtctgtac
ttatatctcgcactgataccatcgaagccagtgctgattcatgacttgggtcgtgtttat
atacaaactggtcctgatgttaagaggtgcattcttagattattagagggaccagttaga
caactcggcatggaaaatactgaattgatgaaattagttgaggcctgtgcaaagggatct
gaaaccttggttacaagggtgatacatattttgaccgaaagaagtttgcctagcatggaa
ctagtttctagagttcgagatctttatcacactaaagtatctgatgtccgattcttaata
ccagtattaaatggtcttaataaagacgaggttatagattctttgcccaaattcattaaa
ctaaatccagtagttttaaaggaagtttttaataagctgctgaataatcaagcaggtcct
acatcatatcctagtccagttacacctatagagttgcttgtagcgttacatacaatagac
acaactagtgcagatttaaaattcgtagtgaaagcaacaagtttgtgtttagcagagaag
gaaatttacacgcaagaagtgatgtcagtagttatacaacaattgatcgacataactcca
ttacctacattgttaatgagaacagtcctgcaatcaatgacaatgcatccaagattatgc
agtttaattatgaatgttttacaaaggctcataatcaaacaggtttggactcaaaaactt
gtatgggatggatttttgaaatgttgtcaacgaaccaaaccgcaatgtttgccagtgttg
cttcatttaccgttgccacaattatcagatacattaactcaatgccctgatctgcatgaa
cctttaaaacagtatattaatggattagatgaggagaaaataaaggcgatagacgatgaa
attattgaagttattttcggaccagatggaaagcctggtatgttaccattcggagtatct
gtaaaaatggaaccagggtcatgtgtgcccattgcagtgaacgatgtgcttccgccagga
ttggaataa

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