Ctenocephalides felis (cat flea): 113388405
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Entry
113388405 CDS
T08578
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
cfel
Ctenocephalides felis (cat flea)
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113388405
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
113388405
3'-5' decay
Other 3'-5' decay factors
113388405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
zf-CCCH
PhoH
PAM2
AAA_22
UvrD-helicase
zf-C2H2_2
zf-C2H2_4
AAA_18
Helicase_RecD
zf-C2H2_jaz
AAA_14
YL1_C
AAA_24
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
113388405
NCBI-ProteinID:
XP_026481572
LinkDB
All DBs
Position
Unknown
AA seq
1773 aa
AA seq
DB search
MSDKEIQAHDLTLRKEFSQAVQLYDLILGPNSNNFKTSKERVIACLMGRAECCQELNRHE
TVILDCRRVLKLLTDSEVNTLGTRVRRRLVHSLYKLKRYSEADSACREWQTLMPNNSEAF
KLLDRYRTVIQMANGQRANQRISQQRLDEEMMNIDEKLELLSTSNRTRKSNKKTSESSHG
VSKKLDFGNNTQLNSFQKQIDHIGNLTLNEVGDKEEMSEIVCTYCSLSFADRAELRTHCQ
SEAHQTVIMSDEGRDWKWRPPPRGFTVDSYTLCESHSLGGPCRYGAQCVEAHGAEELSEW
RERFEYRRMKLQRASEKELYGKSYTEQLLEKWIQAPSPEKIMKERLDGIEETCSSDLVTT
VSSKVSKRDWTFVLKTKLLLRAVALLQDAHRNHFTLKQVFPGEPKPNKKGQHGHKIVEAT
LTSDQEWCVTNLDSKYTDPVTDQSPTLEHRVKVVFSTDIYGTFRQSVVFDFGTEPVLVKH
LCVDVVPVTDADKIKEIKKEIILSTEARWDSENAEIVPFTSTLIPIVSSIDNERDRDLFN
TYPCPRSNTFTLTQCTVMEKRLTRNNYRSRMHELLYVEEMARYEQVARYNLTTKLRITSS
YLLAPSGMATSTAKYSVSGELFALMTLGKDVSEDTSAGRLILNNCTSVFLTSEQSKTQLD
ANGKRKVYEALIEDKGKNMVYMRLSATTVQELNIKADTDFIAEVQFQLNRLTYCEWHYAI
DKIADFRVIFPDTYLEPNIPWTPQRQWSESLDPKLNLKQKEAVVAITTPMHINLPPILII
GPFGTGKTYTLAQAIKQLLLQSDTRILICTHSNSAADLYIKDYLHPWVESGMEEARPLRI
YYHKRWVATANQIVQKYCLIETNGNVRNFQKPTLQDVMKHRIIVVTLSISMELANLGLPK
GYFTHILLDEAAQAMECEAIMPLALAGDQTRIVLAGDHMQLSPELFSAFAKERNLHVSLL
ERLYDHYPGTFPCKILLCENYRAHEAIIHFTSELFYDQKLISSGKQPRHDKFYPLTFFTT
RGEDVQDTNSTAFYNNSEVYEVVERVSELRKKWPAAWGKLDEHSIGIMTPYADQVFRIRS
ELRKRRMGGISVERVLNVQGKQFRAIFLSTVRTRRTCAGTKPDELDYGFLSNSKLLNTAI
TRAQSLVAVVGDPVALCSIGRCRKVWERFIEICNQNKSLFGITWSLLRSQLDGVELKKTY
VLNPLAPEFIPRAFQSEAYIKSQQNSVSTYNTQTNVPPPVPSTQPVRFPSNTNQIPPFMG
APGPPPVYQPPYSVYYYPNQAPPAQNTNVFPPPIRQPAVNASQPPNNVQPSWNNAFSMLS
PKSKVNQQDIPIRMPPVLPTMRSPNNISMPTLQHMTKQQHGLYNMAQRNTPSPPHFVTDN
YDNLARVNQMYNQHINQQIPHPVMPTPTHNKVQPEKEHIQFLQNVHFPERPPVVQETIRT
PEWTLLPPNITFHDMALEPKARQLEWYRHLLDTQGMEPATKFSEILQHVINMNKHQPAAQ
DLYLPNNEISRFDDILNDKPNFAQNLYHNMPNGHGSAGLNMQPDRNWMENKSDMNYINKP
VILRDVENSMMLLQQQQSLREERLLQQQLNAHRTFIPDTTDVPWKFHDATSHSVPLYRRQ
AGQVGGQHNQLQDMYGGEQHNLLDDKVGLNTNSFNFGHNNQPDNVHLLNMHRQHVLSNLT
PQQVSQLQQERLQQQINADFAQSLNLGGRKQESVEEMITRQHAQNSATYASVLRNPVKPI
EEPERNGDPFAVLRDLGHKNNQHNSSGLYHYFQ
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaagaaatccaagctcacgatttaactttacgtaaagagttttcgcaagct
gttcaattgtacgatttaattttgggtcccaactcaaacaactttaaaacctccaaagag
agagtcatagcctgtttaatgggtcgagctgaatgctgccaggaattaaatagacatgaa
acagtaattctagattgcagacgtgttttaaaactattaaccgacagtgaagtcaacact
ttaggtaccagagtccgcagaagacttgtgcactccttgtacaaactaaaaaggtactct
gaagccgactcggcatgcagggaatggcagactctcatgcccaacaatagcgaagctttc
aaactcctggatcgataccgtactgtaatccaaatggccaatgggcaacgtgcaaatcaa
cgtatatcccaacaacgcttagacgaagaaatgatgaacattgatgaaaaactagaacta
ctatccacttccaataggactaggaaaagcaataaaaagacttcagaatcatcacatggg
gtttcgaagaaacttgattttggaaataatactcaattaaatagttttcaaaaacaaata
gaccacatcggtaatttgactttgaatgaggtgggggataaagaagagatgtcggagatt
gtttgtacatattgcagtttgagttttgcagaccgggctgagttgaggactcattgccag
tcggaagcacatcaaactgttattatgtctgatgaaggacgagattggaaatggaggcct
ccaccaagaggtttcacagtagattcatacaccctttgcgagagccatagtttgggagga
ccttgtcgatatggggctcagtgtgtggaggctcacggggctgaagaattgtccgagtgg
agagaacgtttcgaatatagacgaatgaaattgcaaagggctagtgaaaaggaattatat
gggaagagttatacagagcaacttttggagaaatggatccaagccccgagtcccgaaaaa
atcatgaaagaaagactagacggtatcgaagaaacctgttcttcagacttagtaactacg
gtttcatccaaagtcagcaaaagagactggacgttcgttctaaaaacaaaattactttta
cgagccgttgcacttttgcaagacgcccaccgaaaccattttacactaaaacaagtgttt
ccgggcgaacctaaacctaacaaaaaaggccaacatggtcataagatagttgaagccact
ttaacatctgaccaggaatggtgtgttacaaatttagattccaagtatactgatcctgta
acagatcaatcgcctactttggagcatagggttaaagtcgtgttttctacagacatttat
ggtacttttaggcaaagtgttgtgttcgatttcggcactgaaccggttttggtgaagcat
ttgtgcgtggacgtagtcccggtaacagatgctgataaaattaaggaaatcaaaaaagag
attattttatccacggaggcgcgttgggactccgaaaacgctgaaatagttccctttaca
tcaactttaatacctatagttagttctattgataacgagcgcgatcgcgatttatttaac
acatatccttgtccaagatcaaatacgttcactttaacccaatgcacggttatggaaaaa
cgtttgactagaaataattatagatctcgtatgcatgagttgttgtatgttgaagaaatg
gctaggtatgaacaagttgctaggtataatttgaccacaaaacttaggatcacgtctagt
tatttgttggcgccaagtggtatggctacaagtactgccaaatattcggtgagcggcgaa
ttgtttgctctcatgactttgggtaaagacgtgtcggaggatacatcagccggtaggctg
attttgaataattgcacatcggtgtttttgacgtcggagcaatccaagacccaattggac
gccaatggtaaacgcaaagtttatgaggctttgattgaagacaagggcaaaaacatggtt
tatatgagactatcagcaactactgtccaggagctgaatatcaaagccgacacagatttt
attgctgaagtgcagttccaactaaaccgcttgacatattgtgaatggcactacgccata
gacaaaatcgctgactttcgcgtaattttccctgacacgtacttagaacccaacataccc
tggacaccacaacgccaatggtcagaatctttggaccctaaattaaacctaaaacaaaaa
gaagctgtagttgccatcactacacccatgcatatcaacttaccaccgattctaatcatc
ggacctttcggtactggtaaaacctacactttggcccaagcgataaaacaactactacta
caatccgataccaggattttaatttgtacacattcgaactcagctgctgatttgtacatc
aaagactatcttcatccatgggtggaaagtggtatggaagaagccaggcctttacgtatt
tattatcataagagatgggtggcgacagctaatcagattgtacaaaagtattgtttgata
gaaactaatggtaatgtgaggaatttccaaaaacctactttgcaagatgtgatgaagcat
aggattattgtggtgacgttgtcgatatcgatggagctggctaatcttggattgcctaaa
ggatacttcacccacatactcctggacgaagctgcacaagccatggaatgcgaagcaata
atgcccctcgccctcgccggtgaccaaacaagaattgtccttgccggagaccacatgcag
ttaagtcccgaactgttctcagcattcgctaaagaacgaaacttacatgtatcattacta
gaacgtttgtacgatcattatccgggaacattcccctgcaaaattttactgtgcgaaaac
tacagagcacacgaggccataattcactttacttctgaactgttttatgatcaaaaattg
atatccagtggtaagcagccgcggcacgataaattttaccccttgacgttttttacaacg
agaggcgaggatgttcaagatacgaattcaacggctttttataataattctgaggtttat
gaggttgttgaaagggtttcggagttgcgaaagaaatggccggctgcttggggtaaattg
gatgagcacagtatagggattatgacaccttatgctgatcaagtttttcgtataaggtct
gagttaaggaagaggcgtatgggtggtatttcggttgaacgggttttgaatgttcagggc
aaacagtttagagcaatatttttatcaactgtaaggactagacgtacttgtgcaggtacc
aaacctgatgaactagactacgggtttctttcaaattcaaaattattaaacacagcaatt
acgcgtgcacaaagtctggttgctgtggtaggtgacccagtagccttgtgttctattggt
aggtgccggaaggtttgggagcgtttcatagaaatttgtaaccaaaacaaaagtttgttt
ggtatcacttggtcacttcttagatctcaactggacggcgtggagttaaaaaagacttat
gtgctgaatcctttagcacctgaatttataccgcgtgcttttcagtctgaagcttacatc
aaaagccagcagaattctgtaagtacttataatactcaaacaaatgtgccacctcctgtc
ccgtccacgcaacctgttagatttccttcgaatacgaatcaaataccgccgtttatgggc
gcacctggaccaccaccagtgtatcaaccgccgtactcggtttattattatcctaatcag
gcgcctccggcgcaaaatacaaacgtgttcccgccaccaataagacaacccgcggtaaac
gcatcgcaacctccaaacaacgtgcaaccttcatggaacaacgcgttttcaatgctttca
ccgaaaagcaaagtcaaccagcaggatattcctataagaatgcctccggttttaccgact
atgagaagcccaaataatatatcaatgcctacgttgcaacatatgacgaagcagcagcat
ggtttgtacaatatggcgcaaaggaacactccgagtccaccacattttgtcactgataac
tatgataatttggcaagggtgaaccagatgtacaaccagcatataaatcaacaaatacct
catcctgtgatgccgacaccgacgcacaacaaagttcagccggagaaggagcatatacag
tttttgcaaaacgtgcactttcctgaacgaccaccagttgtgcaggagaccatcaggaca
ccagaatggactttgttgccgccgaatataacatttcatgatatggctttggaaccgaag
gctaggcaattggagtggtacaggcatttgttagacacacaaggtatggaaccagccaca
aaattctctgaaattttacaacatgttataaacatgaacaagcatcaaccggcagcacag
gatttatatttacccaacaatgaaatatcgcgtttcgatgatattttaaacgacaaacct
aattttgcgcagaatttgtatcataatatgcctaatggacacgggtctgctggattgaac
atgcagcctgatcgaaactggatggagaacaaaagtgatatgaattatataaacaaaccg
gtgattttgcgggatgttgagaactccatgatgcttttgcaacagcaacagtccttacgg
gaagaaagactattgcaacagcaacttaatgctcatcgaacattcatcccggatactaca
gatgtaccctggaagtttcacgatgctacatcacattctgtacctttgtaccgaagacaa
gctggacaagttggtggtcaacataaccagctacaagacatgtacggcggtgagcaacat
aatctcttagacgacaaagtaggactcaacacaaactctttcaactttggacacaacaac
cagccggacaatgtgcatcttctaaacatgcatcggcaacatgtattaagcaatttaaca
ccgcaacaagtaagtcaattacaacaggaacgtttacagcagcaaatcaacgcagatttt
gcacaatctctaaacttaggcggaaggaaacaagagagcgttgaagaaatgatcaccaga
caacatgcccaaaattcagcaacctatgccagtgttttgcgtaaccctgtaaaacctata
gaagaaccagaacgtaatggtgacccttttgcagttctgcgagatttgggacataaaaac
aaccagcacaactcttccgggctgtaccattatttccaataa
DBGET
integrated database retrieval system
