Caproicibacter fermentans: HCR03_01035
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Entry
HCR03_01035 CDS
T07651
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cfem
Caproicibacter fermentans
Pathway
cfem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCR03_01035 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfem03019
]
HCR03_01035 (groL)
03110 Chaperones and folding catalysts [BR:
cfem03110
]
HCR03_01035 (groL)
03029 Mitochondrial biogenesis [BR:
cfem03029
]
HCR03_01035 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfem04147
]
HCR03_01035 (groL)
Enzymes [BR:
cfem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HCR03_01035 (groL)
Messenger RNA biogenesis [BR:
cfem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HCR03_01035 (groL)
Chaperones and folding catalysts [BR:
cfem03110
]
Heat shock proteins
HSP60 / Chaperonin
HCR03_01035 (groL)
Mitochondrial biogenesis [BR:
cfem03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HCR03_01035 (groL)
Exosome [BR:
cfem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HCR03_01035 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HCR03_01035 (groL)
Exosomal proteins of breast cancer cells
HCR03_01035 (groL)
Exosomal proteins of colorectal cancer cells
HCR03_01035 (groL)
Exosomal proteins of bladder cancer cells
HCR03_01035 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4928
Motif
Other DBs
NCBI-ProteinID:
QNK40944
UniProt:
A0A6N8HYB4
LinkDB
All DBs
Position
202188..203819
Genome browser
AA seq
543 aa
AA seq
DB search
MAKQIIYGEEARKALLNGVNQLADTVKITLGPKGRNVVLDKKFGAPLITNDGVTIAKEIE
LDDAFENMGAQLVKEVSTKTNDVAGDGTTTATLLAQALIREGMKNVTAGANPMAVRNGIQ
DAVDVAVEALKKNSKKVSGPDDIARVAAISASSEFIGKLISEAMAKVTSDGVITVEESKT
AETYSEVVEGMMFDRGYVTPYMVTDTEKMEAIIDDAYILITDKKVSNIQEILPLLEKIVQ
SGKKLVIIAEDIEGEALSTLILNKLRGTFTCVGVKAPGFGDRRKEMLQDIAILTGGQVIS
SELGLELKDATMEQLGRARQVKVDKENTIIVDGAGEKKQISDRVGQIRAQIEKTTSDYDR
EKLQERLAKLSGGVAVIKVGAATEIEMKEKKMRVEDALAATKAAVEEGIVAGGGIALLNT
ISEVQTFVDKSDGDEKTGAKIVLRALEEPLRQIAENAGLEGSVIINKIQSSGKSGYGYNF
ENDQYGDMITFGVVDPTKVTRSALQNAASVAAMVLTTESLVADKKEPTPPAAPSPDAGMG
GMY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagattatttacggcgaggaagccagaaaagcactgttaaacggcgtaaat
cagcttgccgatacggttaagatcactcttgggcccaagggccgcaatgttgttcttgat
aaaaaattcggcgctccgctgatcacaaacgacggcgtaacaatcgcgaaggaaattgag
ctggacgacgcgtttgagaatatgggtgctcagctcgttaaggaagtttccaccaagacg
aacgatgtcgcaggcgacggcaccacgaccgcaactctgctggcgcaggcactgatccgc
gagggtatgaagaatgttaccgcgggcgcaaatccgatggcggttcgcaacggcattcag
gatgccgtcgatgttgccgttgaggcgctgaaaaagaattccaaaaaggtctccggcccc
gacgacattgcacgtgttgctgcaatttccgcatcgagtgagtttatcggcaaactgatt
tccgaagcgatggcgaaagttacatccgacggagtgattaccgttgaggagtctaaaacg
gccgaaacctattcggaagttgtggaaggcatgatgttcgaccgcggttatgtcactcct
tatatggtaaccgacaccgaaaaaatggaagcgatcattgacgacgcttacattctgatt
acagacaagaaagtttccaatattcaggaaattcttccgctcctcgaaaagattgtccag
tccggcaagaagctggtgatcatcgcggaagatatcgaaggcgaggcactttccaccctg
atcctcaacaaactgcgcggcacctttacctgcgtcggcgtcaaggctccgggcttcggc
gacagaagaaaagaaatgctgcaggatattgccattctgacgggcggccaggtgatctcc
tccgaactgggtcttgaactcaaggacgccacaatggaacagctcggccgcgcacgccag
gtgaaagtggacaaggaaaacacgattattgtcgacggtgcgggcgaaaagaaacagatt
tccgaccgcgtcggccagatccgtgctcagatcgaaaagacgacctccgattatgaccgt
gaaaaactgcaggagcgtcttgcgaagctgtccggcggtgtagcggtcattaaagtcggc
gccgcgaccgaaatcgaaatgaaagagaagaagatgcgcgtggaagacgcccttgccgca
accaaggctgcggtggaagagggaattgtcgcgggcggcggcattgctcttctgaatacg
atctccgaggtccagacctttgtcgacaagtccgatggcgatgaaaagacaggcgccaag
attgttctccgcgctctggaagagccgttgcgccaaattgccgaaaacgcaggtctggaa
ggctccgtcatcatcaataaaatccagagttccggaaaatccggttacggttacaacttt
gaaaacgatcagtacggcgatatgattacgttcggcgttgtggatccgaccaaggtgaca
cgttccgctttgcagaacgctgcatccgtcgcggcgatggttctgacaaccgaatcgctt
gttgcggataagaaagaaccgacgcctcccgctgctccgtctcccgatgcgggcatgggc
ggcatgtattaa
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