Caproicibacter fermentans: HCR03_02625
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Entry
HCR03_02625 CDS
T07651
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cfem
Caproicibacter fermentans
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfem03400
]
HCR03_02625 (radA)
DNA repair and recombination proteins [BR:
cfem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HCR03_02625 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
Zn_ribbon_LapB
ChlI
AAA
AAA_22
NTPase_1
Lon_C
AAA_16
AAA_14
Rad51
RecA
AAA_19
TniB
nSTAND3
SLFN-g3_helicase
ABC_tran
Creatinase_N
B12-binding
TIP49
divDNAB
AAA_30
Isochorismatase
GvpD_P-loop
DUF7125
PAXNEB
T2SSE
DUF7589
NACHT
PrpR_N
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QNK41219
UniProt:
A0A6N8I5A1
LinkDB
All DBs
Position
540950..542323
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AA seq
457 aa
AA seq
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MGGKIKSVYVCSECGLESPKWYGKCPGCGQWNTMTEEVVQPVTKKAVGQSGLRRSLPQAV
ALCALSASEEERYHTGMSELDRVLGGGIVKGSLILVGGEPGIGKSTILLQICQYLGQSLK
ILYVSGEESGRQIKLRAERLGVTCENLYILTETDIQAIIEQVREQKPDLVMIDSIQTMNF
TDLNSSPGSVTQVRECTNAIMRAAKTLEIPVIIVGHVNKDGAIAGPKVLEHIVDAVLYFE
GDRQMSYRMLRAIKNRYGSTNEIGVFEMEEDGLHPVDNPSKAMLSGRPSHVSGTCVTCVM
EGSRPILAEIQGLATTSGYGTPRRMATGFDYNRMSLLLAVLEKRAGYYFSNLDAYVNVVG
GLRLDEPACDLAVALALVSSLKNKPLNDSAIVFGEIGLAGELRSVTHSDARISEAKRLGF
ESCILPYHSLNRIRNKWSGIQLIGVKNVREAFEAAIE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaaaaatcaagagtgtttatgtttgctcggaatgtggtttggaatctcccaaa
tggtacggaaaatgtcccggctgcggccaatggaatacaatgaccgaagaggtagtgcag
cccgttacgaaaaaagcggtcggtcagagcggattaaggagatcccttcctcaggcagtc
gctctttgcgcgctttccgcatccgaagaagaaaggtatcatacgggaatgagtgaactg
gaccgtgtgctggggggcggaatcgtaaagggttcgctgattctagtcggcggggaaccg
ggtatcgggaaatcaaccattcttcttcaaatttgtcagtatttggggcaatccctgaaa
attctttatgtttcaggagaagaatcagggcgtcagatcaaactccgcgcggaacggctt
ggggttacctgtgaaaatctttacatattgaccgaaacggacattcaggcgattatagaa
caggtccgtgaacaaaaaccggaccttgtcatgatcgattcgattcaaacaatgaatttt
acggatttaaattcttccccgggaagcgtaacacaggtaagagaatgtacgaatgcaatt
atgcgtgcggccaaaacactggaaattccggttatcattgtcggtcacgtcaacaaagac
ggagccatcgcggggcctaaggttctggagcatattgtcgacgcggttctttactttgag
ggtgatcggcaaatgtcatacagaatgcttcgggcgattaaaaaccgttacggctccaca
aatgaaatcggtgtcttcgagatggaggaagacgggctccacccggtggacaacccgtca
aaagcaatgctgtcaggccggcctagtcatgtttccggcacctgtgtcacctgcgtgatg
gaagggtcgcggccgatcttagctgaaattcagggattagcgacaacttccggttatgga
accccccgccgtatggctaccggctttgactataaccgaatgtctctcctgcttgcagtc
cttgaaaaacgggccggatactatttttcgaatcttgacgcttatgtaaacgtcgtggga
ggattaagattggatgaaccggcctgcgatcttgcagtcgcgcttgctcttgtttcaagc
ctgaaaaataagccgctcaacgattccgcaatcgtattcggcgaaattggacttgcgggc
gaattacgttccgttacgcatagcgacgcccgcatcagtgaagcaaaacgcctgggattt
gaatcctgcattcttccatatcacagtctgaacagaatccgtaacaaatggagcggaatc
cagctgattggcgtcaaaaatgtgagggaggcgtttgaggccgcgattgaatga
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