Caproicibacter fermentans: HCR03_02885
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Entry
HCR03_02885 CDS
T07651
Name
(GenBank) bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cfem
Caproicibacter fermentans
Pathway
cfem00900
Terpenoid backbone biosynthesis
cfem01100
Metabolic pathways
cfem01110
Biosynthesis of secondary metabolites
cfem03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HCR03_02885
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HCR03_02885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cfem03011
]
HCR03_02885
Enzymes [BR:
cfem01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
HCR03_02885
Ribosome [BR:
cfem03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HCR03_02885
Bacteria
HCR03_02885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
PCB_OB
Ig_NUP210_13th
Spt6_S1
PWI_CCDC43
Motif
Other DBs
NCBI-ProteinID:
QNK41266
UniProt:
A0A6N8I4W0
LinkDB
All DBs
Position
complement(584769..586754)
Genome browser
AA seq
661 aa
AA seq
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MKIKVAESAGFCFGVDRAVQTVCRLLDEGKQVCTLGPIIHNPQTLSRFEQRGVKIVNSPA
EVPEGATLVVRSHGVSEDTLDEIAERGIECCNATCLFVQKIQNIVAHASKDGKTVLVAGD
AEHPEIKGIIGHCSGRCLVFKNADELRGIIDRETVRPEEPVCVVSQTTFSVNEWENCLEI
IKRVYTNAAVFDTICNATAIRQSEAAELSRQCDAMIIIGGKQSSNTAKLFELCKKNCAAY
LVESADELPLSALSRAGCIGITAGASTPASIIKEVLDTMSEINQGAGPKENTTEGSFEEM
LEESLKSLNTDEKVHGVVVGVTPSEVLVDVGRKQAGYIPASELSADPNVKPEDLVKIGDE
LDLLIMRTNDQEGTIMLSKKRLDATKGWEKIDAAEEDQSVLDGVVTEIIKGGLIAVTNGV
RVFIPASQATASRTDPIEALLKKEVKFRIIEVNRSRKRAVGSIRSVLKDERKAQADKFWE
TAEVGKVYTGVVKSLTSYGAFVDLGGIDGMIHISELSWSRIKHPSEVVNVGDKVTVYIKG
LDQEKGKISLGYKRPEDNPWEILKKEYPVGSVAEVKVVGMTTFGAFAQVIPGIDGLIHIS
QIADHRIEKPQDVLKINDMVKVKITDIDFDKHRVSLSIRALLEPEEEPEKPAEPAGDETA
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaagtggcagaatccgccgggttttgtttcggcgtggaccgtgcggtacaa
acggtgtgcagactgctcgatgaggggaagcaggtttgcactctgggcccgattatccat
aatccacagacactgagccgatttgagcagcgcggagtaaaaatcgtgaattcgcctgcg
gaagtcccggaaggcgcaactctggtagttcgttcccatggagtttccgaggacactctg
gatgaaattgcagaacgtggaatagagtgctgcaacgccacttgcctcttcgtgcaaaaa
attcaaaatattgtggctcatgcgtcgaaggatgggaaaactgttcttgttgccggagat
gcggaacacccggagatcaaagggatcataggccattgcagcggccgctgcctggttttt
aaaaatgccgacgagctgagaggaatcattgaccgggaaacagtcaggcccgaagagccc
gtttgtgtagtatcgcagacaactttcagtgtaaatgaatgggaaaattgtttggaaatc
atcaaaagggtatatacaaatgccgcagtttttgatacaatatgtaatgcaactgcgata
cgccagtctgaagcggctgaactgtcgcggcagtgcgacgcaatgattatcatcggcgga
aagcagagttccaataccgccaaactttttgaattgtgcaaaaagaactgcgccgcctat
cttgtcgaatctgcggacgagcttccgctgtcggccctgagtcgggctggatgcattggc
attactgcgggcgcgtcgacgccggcaagcattataaaggaggtacttgataccatgtca
gaaatcaaccagggtgccggtcccaaagaaaatactaccgagggaagctttgaggaaatg
cttgaagagtctctcaaaagtttaaatacagatgagaaggttcacggtgtcgttgtcgga
gtaacgccaagcgaagttctggtagacgtaggcagaaaacaggctggatatattcccgct
tccgaactttcggctgatccgaatgtaaaacctgaagatttggtgaaaatcggagacgag
ctggatcttctcattatgcgtacaaacgaccaggaaggaacgatcatgctttccaaaaag
cgcctggacgccacaaagggttgggagaaaatcgatgcggcggaagaggaccagtccgtt
ttggacggcgtcgtcactgagattatcaagggcggtttaattgccgttacaaacggagtg
cgcgttttcattcccgcgtctcaggcaacggcgtcccgcacggatccgattgaggctctt
ctgaaaaaagaagttaaattccgcattatcgaagtaaaccgcagccgtaagcgcgccgtt
gggtccattcgttctgttctgaaagatgaacgcaaggctcaggccgataaattctgggaa
accgctgaagtgggaaaagtatataccggtgttgtcaaatccctgacttcttatggcgcc
tttgtcgatctgggcggcatcgacggaatgattcacatttccgaactttcctggtcaaga
attaaacatccttccgaagtagtaaatgttggcgacaaggtaacggtttatattaagggt
ttggaccaggagaagggtaaaatctctctcggctataaaaggccggaggataatccgtgg
gaaatcctgaaaaaagaatatccggtcggaagtgtggctgaggtaaaagtagtcggtatg
acgacattcggcgcatttgctcaggtgattcccggaatcgacgggttgattcatatctct
cagatcgccgatcaccggatcgaaaagccgcaggatgttctgaagatcaatgatatggta
aaggttaagattacggatattgattttgacaagcatcgcgtcagtctttccatccgcgct
ttattggagccggaagaggagcctgaaaagcccgcggaacccgccggagatgaaacggct
gaataa
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