Caproicibacter fermentans: HCR03_03410
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Entry
HCR03_03410 CDS
T07651
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cfem
Caproicibacter fermentans
Pathway
cfem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HCR03_03410 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfem03400
]
HCR03_03410 (priA)
Enzymes [BR:
cfem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCR03_03410 (priA)
DNA repair and recombination proteins [BR:
cfem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HCR03_03410 (priA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Zn_ribbon_PriA
Helicase_C
ResIII
AAA_16
PIF1
Zn_ribbon_6
AAA_30
ATPase_2
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QNK42497
UniProt:
A0A7G8TFV6
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Position
complement(693701..696154)
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AA seq
817 aa
AA seq
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MSVAVAKVAVENTVYHFDKLFDYRIPTSLLSEAKEGCRVLVPFGTANSKRQGMILERTEQ
EGEPDQKLKPIESVLDKEPLLTPEALQMIPWIGEHTFCTLFDAARLFFPAGILFQVTTEY
LLAGPAGEIAARAEEGEEARIVAYLSRKRAVRRDKLLRDVGLAADSSLPERMLRKGLLQK
NSVTFRKVGDATRKMVRFTDPQELPKLTPRQKCALEVLRGAGCASLKEICYFSGVTPVVV
DALVKKGAAQYFDAEVYRNPYGDVPEGSASPPAKLTAEQDEAYRSLYRQYRAGQGGVSLL
YGVTGSGKTQVFMRLIDRVLEDGRGVIVMVPEISLTPQTISLFHARYGAGVAVFHSGLSL
GERLDEWKRVRNGDASIAVGTRSAVFAPFQNLGLIIMDEEQEGTYKSESSPRYHAREAAK
YRCAYHKCLLVLASATPSVESYYHAQAGRYTLNVLPERYGSAHLPEVDVVDMNGEAEQGN
AGILSGLLAESLRENLRNGMQSILLLNRRGYNTFVSCRACGHVATCPNCSISLTYHAANN
RLMCHYCGYSVPFTRECPNCREEQMRYSGFGTQRAEQQLAELLPEARILRLDADSTMTRF
AYDKKLKQFSEGAYDIIVGTQMVAKGLDFENVTLVGVLSADQSLYGDDFRSYERAFDLLT
QVVGRSGRGKFTGRAVIQTFTPENDIIRLAADQNYAEFYRREIALRKSLLYPPFSDICVI
GFVGRKEEKVRAASETFFTLLCRTAKEDYADQPLRVLSPSPALVGRVSNRYRYKLILKCR
DNKRIRRMISDLLIRFSSDRSYSDVTVFPDMNPETIL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccgtcgcaaaagtcgcggtggagaacacggtttatcattttgataaattg
tttgattaccgcattccgacttctcttctgtccgaggcaaaagaaggctgccgtgtcctt
gttccgttcggcactgcaaattccaaacggcagggaatgattctggaaaggacggaacag
gagggggagccggaccagaagctgaaacccattgaatccgtactggataaggaaccactc
ctgacgccggaggcgcttcagatgattccctggatcggagagcataccttttgcacgctc
tttgacgcggcaaggctcttttttccggcgggcatcctttttcaggtcaccacggaatac
cttcttgccgggcccgccggcgaaattgccgccagagcggaggagggagaggaagcgaga
atcgtcgcttatctgtcccgaaagagggcggtccggcgcgataagcttctgcgtgacgtt
ggacttgcggcggacagcagccttccggagcgaatgcttcgaaagggcctgcttcaaaaa
aacagcgtgacgttccgaaaggttggggacgccacccggaagatggttcgctttacggat
ccgcaggagctgccgaaactgaccccaaggcaaaaatgcgctcttgaagtactgcgaggc
gccggatgcgcctcgttaaaggaaatctgttatttttccggcgttactcccgtggtggtg
gacgctctggtcaagaagggagccgcccagtattttgacgcggaggtataccggaatccg
tacggcgacgttccggaggggtcggcttcaccgccggcaaagctgaccgcagaacaggac
gaggcgtatcgaagcctgtacaggcagtaccgcgccggtcagggaggggtttcgcttctg
tacggagtcacgggcagcgggaaaacacaggtttttatgcggctgatcgaccgtgttctg
gaagacggacggggcgtcatcgtcatggttccggagatttccctgactccgcagacgatc
tccctgttccatgcccggtacggtgcgggggtcgcggtgttccacagcgggctgtccctc
ggcgaaaggctggacgagtggaagcgcgtccggaacggggacgcttccatcgccgtaggg
acccggtccgcggtgttcgcgccgtttcagaatctcgggctcattatcatggacgaggag
caggagggcacttacaaatccgaatcatctccccgctatcatgcccgcgaggccgccaaa
taccgctgtgcctatcacaagtgcctgctggttttggcctccgccacgccgtccgttgaa
agctactatcacgcgcaggcgggcagatataccctgaatgtccttcccgagcgctacggt
tccgcgcacctgcccgaggtcgacgtggtcgacatgaacggagaggcggaacagggcaac
gccggaatcctcagcggccttctggcggagtcgctgcgggaaaaccttcgaaacgggatg
cagtccattttattgctgaaccgaagggggtataatacctttgtctcctgccgggcgtgc
gggcatgtcgcgacctgtccgaactgcagcatctctcttacataccatgcggcgaacaac
cgcctgatgtgtcactactgcggatattcggttccgttcacgcgggagtgcccgaactgc
cgtgaagagcagatgcgctattcggggttcgggactcagcgcgcggagcagcagctggcg
gagctgctgccggaagcccggattttaaggctggacgcggattcgacgatgacccggttt
gcctatgacaaaaagctgaaacagttttccgaaggagcatatgatatcattgtcggaacc
cagatggttgcgaaagggctcgactttgaaaatgtaacgttagtaggggttttatcggcg
gaccaatcgctgtacggcgacgatttccgaagctacgagcgggcgttcgacctgctgacg
caggtggtcggccggtcgggacgggggaaatttaccgggagagccgtcatccagaccttt
actccggaaaacgatattatccgcctcgcggcggaccagaattacgcagagttttacaga
agggaaatcgctctgagaaaatcgctgctgtaccctcccttttccgacatctgcgtgatc
ggctttgtcggaaggaaagaagaaaaggtccgcgcggcgagcgagacttttttcacgctg
ttatgccggacggccaaggaggattacgcggaccagccgctgcgggtgctgagcccgtct
cccgctctggtcgggcgcgtcagcaaccggtaccgttacaagctgatcttaaagtgccgc
gacaataagcggatccgcagaatgatttccgatttgctgattcgcttttcatccgacagg
agctattcggatgtgacggtatttccggatatgaacccggaaacaattttataa
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