Caproicibacter fermentans: HCR03_03565
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Entry
HCR03_03565 CDS
T07651
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cfem
Caproicibacter fermentans
Pathway
cfem00260
Glycine, serine and threonine metabolism
cfem00460
Cyanoamino acid metabolism
cfem00630
Glyoxylate and dicarboxylate metabolism
cfem00670
One carbon pool by folate
cfem00680
Methane metabolism
cfem01100
Metabolic pathways
cfem01110
Biosynthesis of secondary metabolites
cfem01120
Microbial metabolism in diverse environments
cfem01200
Carbon metabolism
cfem01230
Biosynthesis of amino acids
cfem01240
Biosynthesis of cofactors
Module
cfem_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HCR03_03565
09102 Energy metabolism
00680 Methane metabolism
HCR03_03565
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HCR03_03565
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HCR03_03565
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HCR03_03565
Enzymes [BR:
cfem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HCR03_03565
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Met_gamma_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QNK41377
UniProt:
A0A7G8TCN6
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All DBs
Position
complement(721380..722633)
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AA seq
417 aa
AA seq
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MYSDLMDTIGFVSKADPEVGAAMAKELGRQQANLELIASENIVSPAVMAAMGSVLTNKYA
EGYPGKRYYGGCQYVDIVEDLARKRACELFGAEHANVQPHSGAQANLAVYFALLKPGDTV
MGMNLSEGGHLTHGSPVNMSGSYYNFVSYGVSPETGRIDYEAVYETAMKVKPKMIVAGAS
AYPRVIDFKRFREICDACGAILMVDMAHIAGLVAAGEHPNPVEWAQIVTTTTHKTLRGPR
GGLILCKEEYAKAIDKAIFPGTQGGPLMHIIAGKAVCLGEALKPEFKQYAHKIVGNARAL
AEGLLKRKVKLVSGGTDNHLMMVDLTGLELTGKELEQRLDSVNITANKNTVPNEQRSPFV
TSGLRLGTPAVTTRGLDAADMDLIAECIALAIFDFEANREKIRGTVREICARHPLYE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtgatctcatggataccatcggctttgtttcgaaggccgacccggaagtcggc
gccgcgatggccaaggagttgggaagacagcaggcgaatctggaactgatcgcgtccgaa
aatattgtttctcccgccgtgatggccgcaatgggcagtgtcctgaccaacaaatacgcg
gaaggttacccgggaaagcgctattacggcggatgccagtacgttgacattgtggaagat
ctggcgcgcaagcgtgcatgcgaactgtttggcgcggagcacgccaatgtgcagccgcat
tccggcgcgcaggcaaatctcgcggtgtatttcgcccttttaaaacccggcgataccgtc
atgggcatgaacctttcggaaggaggccacctgacccacggctctcccgtaaacatgtcc
ggcagctattacaatttcgtatcctacggcgtcagcccggaaaccggacggatcgattac
gaagcggtctatgaaacggcaatgaaggtgaagccgaaaatgatcgtggcgggcgccagc
gcatatccgcgcgtgattgactttaaacgcttccgtgagatctgcgatgcctgcggcgcg
attttaatggtggatatggctcacatcgccggactcgtcgcggccggggagcatccgaat
ccggtcgaatgggcgcagattgtcaccacgacgacgcataaaacactgcgcggcccgcgc
ggcggcttgattctttgcaaggaagaatacgcgaaagcgatcgataaagcaattttcccg
gggacgcagggcggcccgctgatgcatatcatcgcggggaaggccgtctgtctgggagaa
gctctgaaacccgaatttaagcagtatgcccataagattgttggtaatgcccgggcgctt
gcggaaggcttgctcaaacgcaaggtgaaacttgtctccggcggtacggacaatcatctg
atgatggtcgacctgaccgggctggaactcacgggcaaggagctggagcagcgcctcgat
tccgtcaatatcacggcgaacaaaaacaccgtcccgaacgagcagcgcagcccgtttgtc
acaagcggcctgcggctgggtacgccggcggttaccacgcgcggcctggacgcggcggat
atggacctcattgcggaatgcatcgctcttgcgattttcgattttgaagcgaaccgtgaa
aaaatccgcggaaccgtccgcgaaatctgcgcccgtcacccgctgtatgaataa
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