Caproicibacter fermentans: HCR03_03620
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Entry
HCR03_03620 CDS
T07651
Name
(GenBank) topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cfem
Caproicibacter fermentans
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfem03032
]
HCR03_03620
03400 DNA repair and recombination proteins [BR:
cfem03400
]
HCR03_03620
Enzymes [BR:
cfem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HCR03_03620
DNA replication proteins [BR:
cfem03032
]
Prokaryotic type
DNA Topoisomerases
HCR03_03620
DNA repair and recombination proteins [BR:
cfem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HCR03_03620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
QNK41386
UniProt:
A0A7G8TCP5
LinkDB
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Position
complement(731099..733324)
Genome browser
AA seq
741 aa
AA seq
DB search
MPKKRKEPVRGTGAHGVINRAGETVEERITDTLEKNYMPYAMSVILSRAIPEIDGFKPSH
RKLLYTMYKMGLLGPGRTKSANIVGQTMRLNPHGDAPIYDTMVRLSRGYEALLHPYVDSK
GNFGKFYSRDMAYAASRYTEARLDNLCEELFRDIDRDTVDFVDNYDRTMKEPTLLPATFP
TVLVNANTGIAVGMASSICPFNLAEVCKTTVALLKNQQHDIFSTLLAPDFPGGGQILMNR
DTLKKIYETGRGSIRVRSRYRYDADANCIDVVEIPPTATVEVIVEKVVDLVRQGKVKEIS
DIRDETGLDGLKITIDLKRGTDPDKLMLRLFKMTPLEDSFSCNFNVLVNGTPRVMGVREL
LNEWSKFRVKCVRRRTEYDLKKKQEKLHLLKGLQAILLDIDKAVAIVRSTEGEEEVVPNL
MIGFGIDRTQAEYVAEIKLRHLNREYIMKRTEETAQLELEIAKLQKILGSEAEIRKIICN
ELNQVAEKYGKPRRSELIYPGEIEEYAEEEIPDYPVNLFLTKDGYFKKITPLSLRMGGEQ
KLKEGDEVGQHIESTNSAELLFFTNRCSVYKAKASDFPDMKASVLGEYIPARLVMEDGET
PVYLAVTTDYAGFMMFFYENGKASKVDLTSYETKTNRRRLVNAYSDKSPLVSCTKVEEDR
EFLLVSSQGRMLLLHSGAIQSKTTRSTQGVAVMTLKRSARLLRADPYREGSLQKPDRYRK
TIPAAGSMPAAEDTQGEQMTL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaagaggaaagaacccgtccgcggaaccggtgcgcacggcgtgatcaatcgc
gcgggcgaaactgttgaagaaagaatcacggatacgcttgagaagaattacatgccctat
gccatgagcgtcatcctttcccgagcaattcccgaaatagacggctttaagccgtcgcat
cgaaaattgctttataccatgtataaaatgggtctgctggggcctggcaggaccaagagc
gccaatatcgtcggtcagaccatgcgtttgaatccgcacggcgacgctccgatttatgat
acgatggtgcgcctgagccgggggtatgaggccctgcttcacccttatgtggattccaaa
ggcaatttcggcaagttttattcccgtgacatggcttacgcggcctcccgttatacggag
gcccggctggacaacctctgcgaagagctgttccgcgatattgaccgcgataccgttgat
tttgtcgacaattacgacaggactatgaaggagcccacactgttgccggcaacctttcca
accgtgcttgtcaacgcaaacacggggatcgccgtcggtatggcaagctctatctgtccg
ttcaatctggcggaagtctgcaaaacaacagtggctctgctgaaaaaccagcagcacgat
atcttctctacgctgcttgcgccggatttcccgggcggcgggcagattctgatgaaccgg
gacactctgaaaaaaatttatgaaacgggccgcggctccattcgggttcggtcacgatat
cgctatgacgcggatgcaaactgtatcgacgtggtggagattcctcctaccgcgacggtg
gaagtaatcgttgaaaaggtcgttgacttggtccggcagggaaaagtgaaggaaatttca
gacatccgagatgaaacgggtcttgacggcctgaaaatcaccatcgacctgaaacgggga
acagacccggataagctgatgctgcgcctgtttaaaatgacgccgctggaggacagcttt
tcctgcaacttcaacgtccttgtcaatggaacgccgcgcgtcatgggcgttcgggaactg
ctgaacgaatggagcaaattccgggtcaagtgtgttcgccgcaggacggaatacgacctg
aaaaagaagcaggaaaagctgcatctgctcaaaggacttcaggcaattctgcttgatatt
gataaggcggtggccattgtccgttcgaccgaaggggaagaggaagtagttcccaatctg
atgatcgggtttggcattgaccgcacacaggccgagtatgttgccgaaataaagctgcgc
catctgaaccgcgaatacattatgaaacggaccgaagaaacggcgcagctggagcttgag
attgcaaagctgcaaaaaatattgggcagcgaagcggaaatccgcaaaattatatgcaac
gagctgaatcaggtggcggaaaagtacggaaaaccacggcggtccgaactgatttatccg
ggcgagatcgaggaatatgccgaggaagagattcctgattacccggttaacctgtttctg
acgaaagacggctactttaagaagatcacaccgctttcgctgcggatgggcggagagcaa
aaattaaaggaaggcgacgaggtcggccagcatattgaaagcacaaactcggccgagctg
ctgttttttacgaaccggtgttccgtttataaggcgaaagcctctgattttccggatatg
aaagcaagcgtgttaggcgaatatatcccggcaaggctcgtgatggaggacggcgaaacg
ccggtttatcttgcggtcacgacggattatgcaggttttatgatgtttttttatgaaaac
ggcaaggcgtccaaggttgatcttacttcttatgaaacaaaaacaaaccgacgcaggctg
gtaaatgcctacagcgataaaagtcctctggtatcctgtacaaaggtcgaagaggaccgg
gaatttctgctggtatcttctcagggcagaatgctgttgttgcattcgggcgcaatccag
agcaaaacaaccagatcgacccagggcgtggcggtcatgacgcttaaacggagcgccaga
ctgctccgcgcggacccgtaccgggaagggtccctgcaaaagccggaccgttaccgtaaa
acgattccggcagccggctccatgcccgctgcggaagatacccagggcgaacagatgact
ctgtga
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