Caproicibacter fermentans: HCR03_03890
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Entry
HCR03_03890 CDS
T07651
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
cfem
Caproicibacter fermentans
Pathway
cfem00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HCR03_03890 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cfem01007
]
HCR03_03890 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfem03016
]
HCR03_03890 (alaS)
Enzymes [BR:
cfem01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HCR03_03890 (alaS)
Amino acid related enzymes [BR:
cfem01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HCR03_03890 (alaS)
Transfer RNA biogenesis [BR:
cfem03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HCR03_03890 (alaS)
Prokaryotic type
HCR03_03890 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QNK41430
UniProt:
A0A7G8TCT9
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All DBs
Position
complement(789460..792099)
Genome browser
AA seq
879 aa
AA seq
DB search
MKWTGLNELREIYLSYFESKGHLRLPSFPLIPKDDNSLLLINSGMAPMKKYFTGEVTPPR
KRVTTCQKCIRTGDIENVGITARHGTFFEMLGNFSFGDYFKHEAIPWAWEFCTKVLELPV
DKLWVTIYLDDDEAHDIWVNEVGIDPKHIVRLGKEDNFWEHGSGPCGPCSEIYFDRGEQY
SCGKPTCGVGCDCDRYVEFWNVVFSQFDSDGKGNYPPMEHPNIDTGMGLDRLACIMQGVD
NLFLVDTVQNIMKHISKITGVDYGDSPKSDISLRVITDHVRSTVFMIGDGVMPSNEGRGY
VLRRLLRRAARHGRLLGVHDTFLWRVADTVITENRGAYPELAEKRDMIVKLMRVEEESFS
KTVDQGLSLVNGYLDDTVKAGGKVFSGAEAFLLSDTYGFPIDLTKEIAAERGLSVDEEEF
ARLMKEQKERARAARKNAGADAWAGENDQLEGIPETDFVGYGTMKTEGRVLAILKDGLRC
ESATAGDEVTVVLDRTAFYAESGGQVGDTGIMESDGAVLAVTGTTKNHAKNYLHHAAVKA
GELRAGDAVKAEVDASRRLAIMRNHTSAHLLQAALRSVLGTHVEQAGQLVDEHRVRFDFT
HFSALTGEELKKVENLVNAEILSGLSVECREMPIEEAKKLGAMALFGEKYGSVVRVVSAG
DFSSEFCGGTHTDNTAKIGLFKIVSESSVAAGVRRVEAVTGNNVLAYLDELAGELQQAAS
VLKVNNPAELAQRAEQISAELKEKDRELESLNGRLASMRMESLFAGAKQVGGVRLIAAKL
GEADAEVLRMMCDRVKEHAPDLVAVLAGVQDGKANIAVACAQEALKKGAHAGKIVKEVAA
LAGGGGGGRPDSAMAGTKHPEKLDEAISAAEKIVANMVK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggacgggactgaacgagctgagggagatctatctctcctactttgagtcaaaa
gggcatctgcgccttcccagctttccgctgattccaaaggacgacaacagccttttactg
atcaactccggtatggcgccgatgaagaagtacttcaccggcgaggtgacgcctccgcgc
aagcgagtgacgacctgtcagaagtgcatccgcaccggcgatattgaaaatgtcggcatt
acggctcgccatggaacattttttgaaatgctggggaatttctcattcggcgactatttt
aagcacgaggcgattccgtgggcgtgggaattctgcacgaaggtgctggagctgccggtc
gacaagctttgggtgacgatttatctggacgacgacgaggcgcacgacatctgggtgaac
gaagtggggatcgacccgaagcacatcgtccggctcggcaaggaggacaatttctgggag
cacggttccggtccgtgcggcccctgctccgaaatttatttcgaccgcggcgagcagtac
agctgcggcaagccgacctgcggcgtcggctgcgactgcgaccgctatgttgaattctgg
aacgtcgtgttttctcagttcgacagcgacggcaaggggaattatccgccgatggagcat
ccgaacatcgacaccggcatggggctggatagacttgcctgcatcatgcagggggtggac
aacctgttcctggtcgacacggttcagaacattatgaagcacatttctaaaattaccggg
gtagactacggtgacagcccgaagtcggacatttcgctgcgcgtgattaccgaccatgtc
cgcagcaccgtattcatgatcggggacggcgtcatgccgtcgaacgaagggcgcggctat
gtccttcgccggttgcttcgccgggccgcgcgccacggtcgtctgctcggtgttcacgat
acgttcctttggcgggtggcggataccgtcatcacggaaaaccgaggcgcttacccggaa
ctggcggaaaagcgcgacatgatcgtaaagttaatgcgggtcgaggaagagagcttctcc
aaaaccgtcgatcagggtctttccctggtgaacgggtatcttgacgacacggtcaaggcc
ggcggcaaggttttttccggcgcggaggcatttctgctcagcgatacctacggctttcca
atcgacctgaccaaggaaatcgcggcggagcgcggcctgtccgtggatgaagaagaattt
gcccgcctgatgaaagaacagaaggagcgcgcccgcgcggcgcgcaaaaatgcaggcgcg
gacgcctgggccggggagaacgaccagcttgaaggaattccggaaaccgatttcgtcggt
tatggaaccatgaaaaccgaaggccgggtgctcgcgattctgaaggacggcttgcgctgt
gaaagcgcgacggccggagatgaggttaccgtggtgctggatcggaccgcgttttacgcc
gaaagcggcggccaggtgggcgacaccggcattatggaatccgacggagcagttctggct
gtgaccggaaccacaaaaaatcatgcgaaaaattatttgcatcatgcagccgtcaaagca
ggggagcttcgcgcgggcgacgcggtgaaagccgaggtagacgcgtcgcgaaggcttgcg
attatgcgcaaccatacgtcggcgcatttgctgcaggcggccctgcgaagcgttctcggc
acgcatgtggagcaggcgggccagctggtcgacgagcaccgcgtgcggtttgactttacg
cacttttccgctttgaccggcgaggaactgaaaaaggtggaaaacctggtgaatgccgaa
atcctgagcggcctttcggtggaatgccgtgaaatgccgattgaggaagcgaaaaagctt
ggcgccatggctttgttcggggaaaaatacggcagcgttgtgcgcgttgtttcggcaggg
gatttttccagcgagttctgcggcggtacccacacggataataccgcgaagatcggcttg
ttcaaaattgtgtcggaaagcagcgtcgcggcgggcgttcgccgcgtcgaggctgtaacg
ggcaataatgttcttgcctatctggatgagcttgcaggggaacttcagcaggcggcatcg
gtgcttaaagtgaacaatcctgccgagctcgcgcagagagcggagcagatttcggcggag
ctgaaagaaaaggaccgcgagctggagtctctgaacggcaggctggcgtctatgcgcatg
gagagcctgttcgccggggccaaacaggtcggcggagtccgcctgatcgcggcaaaactg
ggcgaggcggatgcggaagtcctccgcatgatgtgtgaccgcgtcaaagagcatgcgccg
gatctggtcgccgtgttggcgggagttcaggacggcaaggctaatatcgcggtcgcctgc
gcgcaggaagctttgaaaaaaggcgcccacgccggcaagatcgtgaaagaagtcgccgca
ctggccgggggcggcggcggcggacgcccggacagcgcgatggcggggacaaagcatccg
gaaaaactggacgaggcgatttccgctgcggaaaaaattgttgccaatatggtaaaataa
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