Caproicibacter fermentans: HCR03_04455
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Entry
HCR03_04455 CDS
T07651
Name
(GenBank) RNA polymerase subunit sigma
KO
K03093
RNA polymerase sigma-I factor
Organism
cfem
Caproicibacter fermentans
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfem03021
]
HCR03_04455
Transcription machinery [BR:
cfem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HCR03_04455
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Motif
Other DBs
NCBI-ProteinID:
QNK41522
UniProt:
A0A6N8HUE3
LinkDB
All DBs
Position
complement(905193..905912)
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AA seq
239 aa
AA seq
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MCEMNQQAVRAAKDDLFFNSFVRKNELFILKCASETTKRYLTKNDDEWAVALGAFSQAVK
AYSADRGSFSGFAKLVIRRKLIDYIRSQAKFRAETAVSLSTLDSDPEESEENATVSKAVL
YQSERAADDSLKMEIECAGQDFSRYGFSFFDLTKCSPKAEKTKKACAKVIACIVSSSVLV
SEMRRSRCLPIKTLEKNSGVPRKILERHRKYIIAGVEIMTGDYPFLAGYMRYVREELNR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
ttgtgcgaaatgaatcaacaggctgtccgcgcggcaaaggacgatctttttttcaattcc
tttgtacggaaaaatgaattatttattctgaaatgcgcatcggagacaacaaaacgttat
ttaacaaaaaatgacgacgagtgggcggtggcactgggtgcattttcacaggcggtaaag
gcttattcggcggatcgaggcagcttttcagggtttgccaaacttgtaattcgcagaaaa
ctaatcgattacatacggtctcaggcgaaattccgcgcggaaaccgcagtgagtctttcc
acgctggattccgatccggaggagagcgaagaaaacgcaacggtgtcaaaagcggttttg
tatcaaagcgaaagggcggcggacgattctctgaaaatggagatcgaatgcgcgggacag
gacttttcaagatacggattttcattttttgatctgacaaaatgttccccaaaggcagag
aagacgaaaaaagcatgcgcgaaggtcattgcctgcatcgtaagcagctctgttttggtc
agtgagatgaggcgttccaggtgcctcccgatcaaaactttggaaaagaacagcggagtg
ccccgaaaaatactggaacgtcaccgtaaatatatcatagcgggggtagagataatgacc
ggggattatcccttcctcgctggatatatgcgatatgtccgggaggagctgaacagatga
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