Caproicibacter fermentans: HCR03_05045
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Entry
HCR03_05045 CDS
T07651
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cfem
Caproicibacter fermentans
Pathway
cfem02024
Quorum sensing
cfem03060
Protein export
cfem03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HCR03_05045 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HCR03_05045 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HCR03_05045 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cfem02044
]
HCR03_05045 (ffh)
Enzymes [BR:
cfem01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HCR03_05045 (ffh)
Secretion system [BR:
cfem02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HCR03_05045 (ffh)
Eukaryotic Sec-SRP protein
HCR03_05045 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
KTI12
Zeta_toxin
APS_kinase
AAA_33
nSTAND3
AAA_31
ArsA_ATPase
MeaB
AAA_18
VirC1
HTH_Crp_2
ParA
Mlf1IP
MobB
Thymidylate_kin
Fer4_NifH
AAA_16
NPHP3_N
MMR_HSR1
NACHT
DUF2935
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QNK41625
UniProt:
A0A6N8HY44
LinkDB
All DBs
Position
complement(1018841..1020169)
Genome browser
AA seq
442 aa
AA seq
DB search
MAFENLSEKLSAAFKRLRSKGKLNESDVKEAMREVRLALLEADVNYKVAKDFVAKVSERA
VGNEVMESLTPAQMVIKIVNEELTALMGGGETRLNSPSSPPAVVLFCGLQGSGKTTHAAK
LALMLKNQGHRPLLVACDVYRPAAIQQLQVLGSQAGVPVFEQGAGDPVKISREAVKHAKD
YGNDFVLIDTAGRLQIDEALMDELRRIKEAVPPTDILLVVDAMTGQEAVNVAKSFHELLD
ITGVVLTKLDGDARGGAALSVRAVTGRPIKFAGIGEKLSDLEVFHPDRMASRILGMGDVL
TLIEDAQKNLDQKAAQKAAEKMMQNRMDLNDLLDQIRQMKKMGPIQDVLNKMPGMGQQLK
DVQIDDRQIDRTEAILLSMTPQEREKPELMNPSRKRRIAAGSGMKVEDVNRLLKQFEQTR
KLMKQFKKKGMRRRFAGMGLPF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttggcgtttgaaaatctatcggaaaaactttcggcggcgttcaagcgcctgcgctccaag
ggcaagctcaatgagtcggatgtgaaagaggccatgcgggaggtccgtcttgctcttctg
gaggcggacgtcaactacaaggttgcaaaggactttgtcgcaaaggtgagcgagcgcgcc
gtaggaaacgaggtcatggagagcctgactccggcgcagatggtcattaagattgtcaac
gaagagctaacggctttgatgggcggaggggaaacccggctgaacagcccgtcgtccccc
ccggcggtcgtgcttttctgcgggctgcagggttccggtaagacgacccacgccgcgaag
ctggcgctgatgctgaaaaatcagggccatcgtccgcttctggtcgcgtgcgacgtttac
cgccctgccgcgattcagcagctgcaggttctgggaagccaggcgggcgtgcccgtgttc
gaacagggggccggcgacccggtgaaaatcagccgggaggccgtgaagcacgcaaaggac
tacggcaacgactttgttctgatcgacaccgccggacgtctgcagattgacgaggctctg
atggacgagcttcgccgaatcaaggaagcggttcctcccaccgatatcctgttggttgtg
gatgccatgaccggtcaggaagcggtcaacgtggcgaaatcgttccatgagcttctcgat
atcacgggcgtggtcctgaccaagctggacggagacgcgaggggcggcgcagcgctgtcg
gtgcgcgccgtgaccggcaggccgatcaaattcgccggcatcggtgaaaagctctcggac
cttgaggtgttccatccggaccgcatggcgtcccgcattctgggaatgggcgacgtgctt
actctcattgaggacgcccagaagaatctggaccagaaggccgcccaaaaagccgcggaa
aagatgatgcagaaccggatggatctgaatgacctgctcgaccagattcgccagatgaag
aagatggggccgattcaggatgttctgaacaaaatgccgggaatgggccagcagctcaag
gatgtgcagatcgacgaccggcagattgaccggacggaggcgatccttctttccatgacg
ccgcaggaacgcgagaagccggagctgatgaacccgtcgcgcaaaaggcggatcgccgcg
gggagcggcatgaaggtggaagacgtcaaccggcttttaaagcagttcgagcagacccgc
aagctgatgaagcagtttaagaaaaaaggcatgcgccggcgctttgccgggatgggactg
ccgttttaa
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