Caproicibacter fermentans: HCR03_05075
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Entry
HCR03_05075 CDS
T07651
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cfem
Caproicibacter fermentans
Pathway
cfem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HCR03_05075 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfem03400
]
HCR03_05075 (recO)
DNA repair and recombination proteins [BR:
cfem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HCR03_05075 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HCR03_05075 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
QNK41631
UniProt:
A0A6N8HXM4
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Position
complement(1024666..1025430)
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AA seq
254 aa
AA seq
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MRTDAEGLVIMEKCVGDSDRLITVLTKEKGILRAFVQRPGRAKNGRLSATRLFSYSRFTV
FEGRDKYIIDDARPIEVFFDLRKDIERLSLAQYFCELSLALAPQDSPAGEYLRLVLNALY
FLGRGDRPARIIKSVVEMRMLALSGYQPDLVGCSECGRFESDTMYFLPVSGRIICGECGC
PQGETSVRLGRGAMAGLRHTIYASLEKAFSFTLSPQGTEELGRAAEAYVLSTLSRGFATL
DFYHATAGDTGWRG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaggacggacgccgagggcttagttatcatggagaaatgcgtgggtgacagcgatcgg
ctgatcaccgtcctcacaaaggaaaaaggaattttgcgggcttttgttcagcggccgggc
cgggccaaaaacggcaggctttccgcgacaaggcttttcagttactcccgcttcacagtt
tttgaggggcgggataaatacataatcgacgacgcccggccgatcgaagtgttttttgac
cttcggaaggatatcgagcgtctttcgcttgcccaatatttctgcgagctttcccttgcc
cttgctccgcaggattcgcccgccggagaatatctccgcctggttctcaacgcgctttat
tttcttggccgcggggaccggcccgcgcgcattatcaaatcggtcgtggaaatgcgcatg
ctggccctttcgggctatcagcccgatctggtcgggtgttcggaatgcgggcggtttgaa
tcggataccatgtattttcttccggtctccggcagaattatctgcggagaatgcggctgt
cctcaaggggaaacgtctgtccgactggggcgcggcgcaatggcaggtctgcggcatacg
atttacgcgagtctggaaaaagccttttccttcacgctctctccgcagggaacggaagaa
ttggggcgggccgcggaagcctatgttctcagcacgctgagccgcggttttgccactttg
gacttttatcacgcaacggccggggacaccgggtggagagggtaa
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