Caproicibacter fermentans: HCR03_05400
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Entry
HCR03_05400 CDS
T07651
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
cfem
Caproicibacter fermentans
Pathway
cfem00750
Vitamin B6 metabolism
cfem01100
Metabolic pathways
cfem01240
Biosynthesis of cofactors
Module
cfem_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
HCR03_05400 (pdxS)
Enzymes [BR:
cfem01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
HCR03_05400 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
Dus
His_biosynth
NanE
DUF2795
Peptidase_S66C
Motif
Other DBs
NCBI-ProteinID:
QNK42531
UniProt:
A0A6N8HXB6
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Position
1086837..1087718
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AA seq
293 aa
AA seq
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MDSERLGLNRNLAQMLKGGVIMDVTNAKEAAIAQESGAVAVMALERVPADIRNEGGVARM
SDPKMIKEIQKAVSIPVMAKVRIGHIAEAQILEALGIDFIDESEVLTPADEMYHIDKSAF
KVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVRHMRTVMSEIRELSNKPKEE
LMTYAKENGAPYDLVVSVAENKKLPVVNFAAGGIATPADAALMMQLGSEGIFVGSGIFKS
DHPLPRAKAIVKAAAYYDKPEILAEVSEGLGEAMKGIDIKTIAPEDQFAKRGW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaaagacttggactcaacaggaatcttgcccagatgctgaaaggcggcgta
attatggacgtcaccaatgcaaaggaagctgcaatcgcccaagaatcaggtgcagttgct
gtcatggctctggaaagggttcctgccgatatcagaaacgagggcggagttgcccgtatg
agcgaccccaaaatgataaaggaaattcaaaaagccgtatctattcccgttatggcaaaa
gtacggatcggccacatcgcagaagcacagattcttgaggctctcggcattgattttatc
gacgagagtgaagttctgaccccggcagatgaaatgtatcatatcgataaatcggcattt
aaagttccgtttgtctgcggtgctcgaaatctgggtgaagctcttagaaggataggcgaa
ggggcctccatgatccgtacaaaaggagaggcgggtacgggaaatgtcgttgaagctgta
cgccatatgagaaccgtaatgtcggagatcagggagctttccaataagccaaaagaggaa
cttatgacttacgcgaaagaaaacggagcgccctatgatttggttgtatcggttgcggaa
aacaagaaactgcccgttgtcaattttgccgcaggaggaattgcgactccggctgatgca
gctttgatgatgcagctgggaagtgaagggattttcgttggatccggcatatttaaatcc
gatcatccgctccctagagcgaaagcgattgtaaaagcagctgcgtattatgacaaaccg
gaaattcttgccgaggtaagcgaagggcttggagaggctatgaaaggaattgatattaaa
acaatagctcccgaagaccagtttgctaaaaggggctggtaa
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