Caproicibacter fermentans: HCR03_09520
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Entry
HCR03_09520 CDS
T07651
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cfem
Caproicibacter fermentans
Pathway
cfem00521
Streptomycin biosynthesis
cfem00523
Polyketide sugar unit biosynthesis
cfem00541
Biosynthesis of various nucleotide sugars
cfem01100
Metabolic pathways
cfem01110
Biosynthesis of secondary metabolites
cfem01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HCR03_09520 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HCR03_09520 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HCR03_09520 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HCR03_09520 (rfbB)
00525 Acarbose and validamycin biosynthesis
HCR03_09520 (rfbB)
Enzymes [BR:
cfem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HCR03_09520 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
FtsJ
Sacchrp_dh_NADP
NmrA
NifZ
KR
Motif
Other DBs
NCBI-ProteinID:
QNK42417
UniProt:
A0A7G8TFM6
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Position
1924847..1925866
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AA seq
339 aa
AA seq
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MKLLVTGGAGFIGGNFMHYILNKYPKDKVICLDALTYAGNMETLADVMDNPNFTFVKGDI
SDRDTVFQLFEKEKPDVVVNFAAESHVDRSIEDPGLFLHTNILGTGVLMDACRKYGIQRY
HQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSASKASADLLVLAYHRTFHLPISISHC
SNNYGPYHFPEKLIPLMIANALNDKPLPVYGKGENIRDWLYVEDHCSAIDLIVRKGREGE
IYNIGGHNERTNLQVVKAILKELGKPESLIRFVTDRPGHDRRYAIDPTKIHNELGWEPTT
RFEDGIKLTVKWYLENRTWWEHIINGEYQNYYERMYGHR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcttgtaacaggcggcgctggatttatcggcggcaattttatgcattatatt
ttaaacaaatatccgaaagacaaagtcatctgtctggacgctttgacctatgccggaaac
atggaaacgcttgccgatgtgatggataacccaaactttacgtttgtaaaaggcgatatt
tccgatagagacaccgtgtttcaactgtttgaaaaggaaaagccggatgttgtcgtcaat
tttgccgcagaaagccatgtggatcgttccattgaggatcctgggctttttttgcacacc
aatattctgggaaccggcgttttaatggatgcatgccgaaaatatggaattcaaagatat
catcaggtttcgacggacgaggtatacggcgacttgcctttagacaggcccgatttgttt
tttacggaggaaacgccgctgcacacctccagtccctattccgcttcaaaggcgtcggcc
gacctgctggtactggcataccaccgaacatttcatctgcccatcagcatttcgcactgc
tccaacaattacgggccgtatcattttcctgaaaagctgattccgctgatgattgcgaac
gcgttgaacgacaagccgctgcccgtttacggcaagggtgaaaacattcgggattggctg
tatgtcgaagaccactgctctgctatcgacctgattgtgcgtaagggccgcgagggcgaa
atttataatattggcggccataacgagcgcacgaatctgcaggttgtcaaagcaatcctg
aaagagctcggcaaaccggaaagtcttatccgttttgtcaccgaccggccggggcatgat
cggcggtacgcgatcgacccgaccaagattcataacgaactgggctgggagccaactacc
cgttttgaggatggcattaagctaaccgtaaagtggtatttggaaaaccgtacgtggtgg
gaacacatcataaatggagaataccagaactattatgaaagaatgtatggacaccggtaa
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