Caproicibacter fermentans: HCR03_11505
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Entry
HCR03_11505 CDS
T07651
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
cfem
Caproicibacter fermentans
Pathway
cfem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HCR03_11505 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfem02000
]
HCR03_11505 (abc-f)
01504 Antimicrobial resistance genes [BR:
cfem01504
]
HCR03_11505 (abc-f)
Transporters [BR:
cfem02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
HCR03_11505 (abc-f)
Antimicrobial resistance genes [BR:
cfem01504
]
Gene variants
Macrolide resistance genes
Transporters
HCR03_11505 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
NB-ARC
MMR_HSR1
NACHT
AAA_23
AAA_16
ABC_tran_Xtn
MobB
Motif
Other DBs
NCBI-ProteinID:
QNK39379
UniProt:
A0A7G8T6Y8
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All DBs
Position
2328681..2330159
Genome browser
AA seq
492 aa
AA seq
DB search
MSLIRISNLTFAYDGSPDCVFENASFEFDTNWKLGLIGRNGKGKTTLLNLLMGKYEYRGT
ISASVGFDYFPFEVPDESKSALELFHSLVPDCEDWRAERELSLLDVSPNAAERPFSTLSR
GEQTKILLAALFLKENRFLLIDEPTSHLDLEARERTARYLRSKSGFLLVSHDRAFLDGCV
DHILSINRKSIDLEQGNCSSFLENKRLRDEFELAEHKKLERTVKRLSDAAERTSGWSDRV
EQTKHSTRNSGLRPDRGYIGHKSAKMMKRAKSTEARREKAVREQSELLQNLDTAESLKIH
PLSPPNGLLAEARELCLYYGSRKVCGPVSFRLCAGDRLSLRGRNGSGKSSLLKLFTGQKI
DYTGDFRSAPWLVVSHVPQETDFLRGTLTEFAESRGIDRTLLFSILRKLDFSRALFEQDT
AGYSEGQKKKVLLAASLCEPAHLYLWDEPLNYVDLLSRVQLEELIRAFSPTMLFVEHDRA
FQNSVSTGFVEL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgatccgaatatcaaacctgacctttgcttatgacggcagtccggactgcgtt
tttgaaaacgcgtcgttcgaattcgacaccaactggaagctcggtctgatcggccgcaac
gggaagggcaaaacaacccttctgaatcttctgatggggaaatacgagtaccggggaacc
atttccgcgtccgtcggattcgactatttcccgttcgaggtgccggacgaatccaaatcc
gccctggagctttttcacagtcttgttccggactgcgaggactggcgggccgagcgggag
ctgtccctgctggacgtttcgccaaacgccgcggagcgcccgttttccacgctgagccgg
ggcgaacaaaccaaaatactgctggcggcgctctttttaaaagaaaaccgctttctgctc
atcgacgaaccgaccagccaccttgatctggaagcccgcgagcgcacggcgcgctatctg
cgctccaaaagcggattccttctggtttcgcacgaccgcgcgtttctggacgggtgcgtc
gaccacatcctttccatcaaccgcaaaagcatcgacctggaacaggggaattgttcgtcg
tttctggaaaacaagcgcctgcgcgatgaatttgagctggccgaacacaaaaagctggag
cggacggtcaaacgtctttccgacgccgccgagcgaacctccggctggtcggaccgcgtg
gaacagaccaaacacagcacgcgaaattccggactgcgccccgaccggggatacatcggc
cacaagtccgcaaagatgatgaagcgggcaaaatcgacggaagcccgccgcgaaaaggcg
gtgcgggaacagtcggagctgctgcaaaacctggacacggccgaaagcctgaaaatccac
ccgctttccccaccgaacgggcttctggccgaggcgcgggaactatgcctgtattacggc
agccggaaggtctgcggcccggtttcgtttcgcctgtgcgcgggcgaccggctgtctctg
cgcggacgcaacggcagcggaaaatcgagcctgctgaaactcttcaccgggcaaaaaatt
gattataccggcgactttcgctccgcgccgtggctcgtcgtttcgcatgtgccgcaggag
acggattttcttcgcggcactctgacggagtttgccgagtcacggggaatcgaccggacc
ctgctgttttccattctgcgcaagctggatttttcgcgcgccctgttcgaacaggacacg
gcgggctacagcgaggggcagaaaaagaaggttctgctcgccgcgagtctgtgcgaaccg
gctcacctttatctctgggacgaaccgctcaattacgtcgatctgctctcccgcgtgcag
ctggaggaattgatccgcgcgttttcgcccaccatgcttttcgtcgagcacgaccgcgcg
tttcaaaattccgtttccacgggctttgtcgagctttag
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