Caproicibacter fermentans: HCR03_11890
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Entry
HCR03_11890 CDS
T07651
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
cfem
Caproicibacter fermentans
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HCR03_11890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
Tex_central_region
S1
HHH_9
S1_RRP5
YqgF
HHH_7
RNase_II_C_S1
RuvC
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QNK39449
UniProt:
A0A7G8T758
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Position
2404645..2406798
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AA seq
717 aa
AA seq
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MNPTLELTRQFGLQEWQVKNIVELIDAGNTIPFIARYRKEAHGSLDDQKLREIAERLEYL
RSLEKRREEVGALIGETGLMTPETAAALQKAETLAEIEDIYRPFRPKRKTRASVAKEKGL
APLAELIEKQGPGEPLSFAKQYADPEKGVDTPEDALAGALDIIAENVSDNAQIRRRLRVV
TLAHGILVSKAAKPDEDSVYAPYYDYREPMNKIAGHRVLAVDRGEKEEFLKVSVELDPAR
GLNIVFSECVRGDTACARAVRSACEDAYTRLIFPSIEREIRNSLTEAADESAVKVFAVNL
RQLFMQPPVRGKIAMGLDPGYRTGCKVAVVDATGRVLDTGVIYPTHSQAKVEQAKETIRR
MILKHHVEVIAIGNGTASRETEQFAAEVIRELDAGVSYMVVSEAGASVYSASKLAAQEFP
EFDVTLRSAVSIARRLQDPLAELVKIDPKAVGVGQYQHDMPKKMLDSALSGVVEDCVNSV
GADLNTASPSLLEHIAGITAAVSKNIVKYREENGAFRARKELLKVPKLGPKAFEQCAGFL
RVPESENILDHTAVHPESYDAAKALLKLCDYSPAEVKRGSFPGLAEKVTQIGKEKAAAVA
GVGVPTLMDIVAELQKPGRDPRDELPKPLLRTDVMKLEDLKPGMELTGTVRNVIDFGAFV
DIGVHQDGLVHVSEVCDRFIRHPSEVLKVGDIVKVRVLSVDVKKQRISLSMKQQKKV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaccctggaattgacacgacagttcggcctgcaggaatggcaggtgaaaaac
atcgtcgagctgatcgacgcaggaaacacgattccgttcatcgcgcgctaccgcaaggag
gcgcacggctcgctggacgaccagaagctgcgggaaatcgcggagcggctggaatatctg
cgctcgctggaaaaacgccgggaggaagtcggcgcgctgatcggggaaaccggccttatg
acgccggagacagcggcggcgctgcaaaaggcggagacgctggcggaaatcgaggacatt
taccgcccgttccgccccaaacgaaagacgcgcgcgtccgtcgcaaaggaaaaaggactg
gccccgctcgcggagctgattgaaaagcagggccccggcgaaccgctttcttttgcaaag
cagtacgccgacccggaaaaaggagtcgatacgccggaggacgcgctcgccggcgcgctc
gacatcatcgcggaaaacgtctccgacaacgctcagatccgccgcaggctccgcgtcgtg
accctcgcgcacgggattctggtttcaaaagcggcgaagccggacgaggacagcgtttac
gctccgtattacgattaccgcgagccgatgaacaaaatcgcggggcaccgcgtgcttgcc
gtcgaccgcggggaaaaagaagaatttttaaaggtttccgtcgagctggaccctgcccgc
gggctgaacatcgtgttttccgaatgcgtccgcggcgataccgcctgtgcccgcgcggtg
cgctccgcctgcgaggatgcttacacccggctgatttttccctccatcgagcgggaaatc
cgcaactccctgacggaagcggcggacgaatcggccgttaaggtattcgcggtcaatctg
cggcagctgttcatgcagccgccggtgcgcggcaaaatcgcgatgggccttgacccgggg
taccgcacgggctgcaaggtcgccgtggtggacgcgaccggacgcgtactggacaccggg
gtcatttacccgacccattcgcaggcgaaggtggagcaggccaaagaaaccatccgccgg
atgattttgaagcatcatgtggaggtcatcgccattggaaacggcaccgcgtcgcgcgag
acggagcagttcgccgccgaggtcatccgcgagctggacgcgggcgtttcctacatggtg
gtcagcgaggcgggcgcgtccgtctattcggcgagcaagctggccgcgcaggaattcccg
gaattcgacgtaaccctgcgcagcgcggtctcgatcgcgcgccgtttgcaggacccgctg
gcggagctggtcaaaatcgacccgaaggcggtcggcgtgggccagtaccagcacgacatg
ccgaaaaagatgctggactcggcgctttccggcgtggtggaggactgcgtcaactcagtc
ggcgcggacctgaacacggcctcgccgtcgcttctggagcatattgccggaatcactgcg
gcggtatcgaaaaacatcgtaaaataccgtgaggaaaacggtgcgttccgcgcccgcaaa
gagcttttaaaggtaccgaagctcggcccgaaggccttcgagcagtgcgcgggatttctg
cgcgttcccgaaagtgagaatattctggaccacaccgccgtacacccggaatcctatgac
gcggcgaaggcgctgttaaaactgtgcgattacagccccgccgaagtaaaacggggaagc
tttccgggtcttgcggaaaaggtgacgcaaatcggaaaggaaaaagccgcggcggtggcc
ggggtcggcgtgccgacgctgatggacatcgtcgccgagctgcaaaagccgggccgcgac
ccgcgcgacgagctgccgaagccgcttcttcgcaccgacgtgatgaagctggaggatttg
aagccgggcatggagctgaccggcacggtccgcaacgtgatcgatttcggcgcgtttgtc
gacatcggcgtgcatcaggacgggctggttcacgtttccgaagtttgcgaccggtttatc
aggcacccgtcggaggtcctgaaggtcggggatattgtcaaggtccgcgtcctgtcggtc
gacgtgaagaagcagcgcatttccctttcgatgaagcaacagaagaaagtttga
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