Caproicibacter fermentans: HCR03_12065
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Entry
HCR03_12065 CDS
T07651
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cfem
Caproicibacter fermentans
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfem03032
]
HCR03_12065 (gyrA)
03400 DNA repair and recombination proteins [BR:
cfem03400
]
HCR03_12065 (gyrA)
Enzymes [BR:
cfem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HCR03_12065 (gyrA)
DNA replication proteins [BR:
cfem03032
]
Prokaryotic type
DNA Topoisomerases
HCR03_12065 (gyrA)
DNA repair and recombination proteins [BR:
cfem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HCR03_12065 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QNK39483
UniProt:
A0A6N8HYW8
LinkDB
All DBs
Position
complement(2437906..2440431)
Genome browser
AA seq
841 aa
AA seq
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MDEIEENSRIISVDLEKEMKKSFLDYSMSVIVSRALPDVRDGLKPVHRRILYTMFQNGLM
PDKAYRKCADTVGSVLGSYHPHGDASVYDALVRLAQNFSMRYMLVDGHGNFGSVDGDPPA
AYRYTEARMSKIALEMLQDIDKETVDFQPNYDDRLKEPVVLPSHFPNLLVNGSTGIAVGM
ATNIPPHNMREVIDGVCTLIDNRDATLEDLMQSIQGPDFPTGGIIMGRSGIRAAYGTGRG
RVIVRARAEIEEEKNGRFNIIVTELPYQVNKARLIESIADLVKEKRIEGISNIEDHSDRE
GMHIVINVKRDASPQIVLNQLYTYTQMQTTFGVNMLAIVNGEPKTLTLREILLEYLKFQE
DVVRRRTEYDLKKARERAHILEGLKIAVDNIDEVVRIIRSSKSIPEARSRLSERFGLDEV
QTQAIVQMPLGRLTGLERQKLEDELAALMVKIADYEDILAHEERVLAIIRAEAVAVRDKF
GDERRTEIAAVTGEVDIEDLIPVEECMLTMTSFGYVKRQKTDTYRTQRRGGRGVSGMTRR
EEDVATDMFVIGSHDYVMFFTNLGRVYRLKCYEIPEGARTSKGINIANLLPIAQEEKVTS
MIRVPEFDEESYLVMVTKNGIVKRTALSAYDTARKGGVIAIDLDEGDELSWVRMTSGKDD
LLVATRQGMAIRFNEQDARAMGRATRGVKAISLAEGDCVVGMVVLVPGTLVLTVSETGFG
RLSPESDYRSQFRGGKGLMNYHTERYGSVAAIQAVGLDDDVILISSGGIIIRILASSIRQ
CRRPSKGVLLMRLTEDSRVVTVACTAHDDEEEAEEAVDDGSADEGADGADAGTEGEPEQE
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatagaagaaaacagcagaattatcagcgtggaccttgaaaaggaaatgaaa
aaatcattcctcgattactccatgtccgtcattgtttcgcgcgcgctgccggatgtgcgc
gacggactcaagccggtccacagaagaattctttacaccatgtttcaaaacggcctgatg
ccggacaaggcctaccgcaaatgcgccgacaccgtcggctccgttctgggcagctaccat
ccgcacggcgacgcttcggtctatgacgcgctggtgcgtctggctcagaatttttccatg
cggtacatgctggtcgacggtcacggaaacttcggttccgtggacggggacccgccggcc
gcctaccgttacacggaagcgcgcatgagcaagatcgcgcttgaaatgctgcaggatatc
gacaaggaaaccgtcgatttccagccgaactacgacgaccgtctgaaagagccggtcgtt
ctgccaagccattttccgaaccttctggtcaacggctcgacgggcatcgccgtcggcatg
gcgaccaatattccgccgcataatatgcgtgaggtcatcgacggcgtctgcaccctgatc
gacaaccgcgacgccactctggaggacctgatgcagagcattcagggcccggatttcccg
accggcggcatcatcatgggccgcagcggaatccgcgcggcctacggcacggggcgcggc
agggtcatcgtccgcgcccgcgcggaaattgaagaagaaaagaacgggcggttcaacatc
atcgtgacggaactcccctatcaggtcaataaggcgcggctgatcgaatcgatcgcggat
ctggtcaaggaaaagcggatcgagggcatttccaatatcgaggaccactccgaccgcgag
gggatgcacatcgtcatcaacgtcaagcgcgacgcttccccgcagatcgtattaaaccag
ctgtacacctacacgcagatgcagacgacgttcggcgtgaacatgctcgccatcgtcaac
ggcgaaccgaaaacactgacgctgcgcgaaattctgctggaatacctgaaatttcaggag
gacgttgtccgccgccgcacggagtacgacctgaaaaaggcgcgggagcgcgcccatatt
ctggaagggctgaaaatcgcggtcgacaatatcgacgaggtggtccgcatcatccgttcc
tcaaaatccattccggaggcccgttcccgcctgagcgaacgctttggtctggacgaagtg
cagacgcaggccattgtgcagatgccgctcggccgcctgaccggtctggaacgccagaag
ctggaggacgagcttgccgcgctgatggtcaaaatcgcggattacgaggatattttggcg
catgaggagcgcgtgctcgccatcatcagggcggaggccgtcgccgtgcgcgacaaattc
ggcgacgaacgccgcacggaaatcgccgccgttaccggagaggtcgatattgaagacctg
attccggtggaagaatgcatgctgaccatgaccagtttcggttacgtcaaacgccagaaa
acggatacgtaccgcacgcagcggcgcggcggccgcggcgtaagcggcatgacccggcgc
gaggaggatgtcgcgaccgacatgtttgtcattggctcgcacgattatgtcatgttcttt
acaaacctgggccgcgtctaccgactgaaatgctacgagattccggaaggggcgcgcacg
tccaagggaatcaatatcgcgaacctgctgccgatcgcgcaggaggaaaaggtcacctcc
atgatccgcgtgccggaattcgacgaggaaagctatcttgtcatggtgacgaaaaacggt
atcgtcaagcgcacggcactctccgcctacgacaccgcgcgcaagggcggtgtcatcgcg
atcgatctggacgagggcgacgagctttcgtgggtgcgcatgacaagcggaaaggacgac
cttctggtcgcgaccagacagggcatggcgatccggttcaacgaacaggacgcccgcgcc
atgggccgcgcgacccgcggcgtgaaggcgatttcgcttgccgagggcgactgtgttgtc
ggtatggtggttctggttccgggcacgctggtgctgaccgtttccgaaaccggattcggc
cgtctgtcgccggaaagcgactaccgctcgcagttccgcggcggcaaggggctgatgaat
taccacacggagcgctacggcagcgttgccgccattcaggcggtcgggctggacgacgat
gtaattttgatttcctccggcggaatcatcatccggattctggcgagttccatccgtcaa
tgccgccgcccgagcaagggcgtgctgctgatgcgcctgaccgaagacagccgcgttgtc
acggtggcctgcaccgctcacgacgatgaggaggaagcggaagaagccgtcgacgacgga
agcgcggacgaaggggcggacggcgcggacgccgggacggaaggcgaaccggaacaggaa
gtgtaa
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