Caproicibacter fermentans: HCR03_12515
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Entry
HCR03_12515 CDS
T07651
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cfem
Caproicibacter fermentans
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfem03016
]
HCR03_12515 (truB)
Enzymes [BR:
cfem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HCR03_12515 (truB)
Transfer RNA biogenesis [BR:
cfem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HCR03_12515 (truB)
Prokaryotic type
HCR03_12515 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QNK39561
UniProt:
A0A7G8T7H0
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All DBs
Position
2527887..2528786
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AA seq
299 aa
AA seq
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MNGILILDKPAGFTSFDAVAVMRGLTHEKKIGHTGTLDPMATGVLPLLLGCATRANALLP
DTDKEYEAGFRLGIATDTQDTTGKTTAESDRGASREAVEAALGAFRGEILQVPPMVSAIS
VGGKRLYDLARQGIEVEREPRPVTIRELELLSYDEPSRSGTLRIACSKGTYIRTLCADLG
EALHTYGVMSSLRRTRASGFTLADSVTLDRAKELAAGGRLAERLLPVESLFSGMPAVSVS
PAQAARFQNGGALDLERTALRRALPAEDAVFRVQGPDGAFLGLGRASAGQLRVLRLFRR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaatcctgattctggacaagcccgccggctttacctctttcgacgcggtcgcg
gtgatgcgcgggctgacgcatgaaaaaaagatcgggcacacgggcacgctggacccgatg
gcgaccggcgtgctgcccctgctgctcggctgcgcgacgcgcgcgaacgctctgctgccc
gacaccgacaaggagtacgaggcgggtttccggctgggaattgcgacggatacgcaggac
acgaccggaaaaacgaccgccgaaagcgaccggggcgcgtcccgcgaagcggtggaggcg
gcgctcggggcgttccgcggcgagattctgcaggtgccgccgatggtttcggccatcagc
gtcggcggaaaacgcctttacgaccttgcgaggcagggaatcgaagtggagcgcgagccg
cgtccggtcacgatccgtgaactggagctgctgtcctacgacgagccgtcgcgcagcggc
acgctgcgaatcgcctgttccaagggaacctatatccgcacgctctgcgcggatcttggg
gaagcgctgcatacatacggcgtgatgtcatccctccgccggacgcgcgcgtccggtttt
acgctggcggacagcgtcacgctggaccgggcaaaggaactggcggccggcggacggctc
gccgaaaggctcttgccggtggagtcgctgttttcagggatgccggcggtctccgtttca
ccggcgcaggcggcccgctttcaaaacggcggggcgctggacctcgaaagaacggcgctg
cggcgcgcactgccggcggaggacgccgttttccgcgtgcaggggccggacggggccttt
ctcggcctgggccgggcgtcggccggccagctgcgcgtgctgcgcctgtttcggcgctga
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