Caproicibacter fermentans: HCR03_13250
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Entry
HCR03_13250 CDS
T07651
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
cfem
Caproicibacter fermentans
Pathway
cfem00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HCR03_13250 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cfem01007
]
HCR03_13250 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfem03016
]
HCR03_13250 (aspS)
03029 Mitochondrial biogenesis [BR:
cfem03029
]
HCR03_13250 (aspS)
Enzymes [BR:
cfem01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HCR03_13250 (aspS)
Amino acid related enzymes [BR:
cfem01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HCR03_13250 (aspS)
Transfer RNA biogenesis [BR:
cfem03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HCR03_13250 (aspS)
Prokaryotic type
Other AARSs
HCR03_13250 (aspS)
Mitochondrial biogenesis [BR:
cfem03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HCR03_13250 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QNK39690
UniProt:
A0A7G8T7U9
LinkDB
All DBs
Position
2680258..2682042
Genome browser
AA seq
594 aa
AA seq
DB search
MPESLTGLKRTNYCGELRAADCGREVTVCGWVQRQRDLGQLIFIDLRDRTGIVQLAFGDK
TDREVFQKAFAARAEFVLAARGTVRERSAKNAELPTGDIEIEVEELRVLAKSETPPFAIE
EKTDVKEDLRLKYRYLDLRRPEMQRKIIGRHRIVKAARDYFDENGFLEIETPNLIKSTPE
GARDYLVPSRMFPGSFFALPQSPQLYKQLLMLSGYDRYMQVARCFRDEDLRADRQPEFTQ
IDFEMSFVSQDDVMAIAEGFIKDVYQKVLGLEIRTPLRRMTWQEAMNRFGSDKPDLRFGM
ELTDVSEALKNTEFRVFAGALSAGGSVRGINLKRQADALSRKEIDKLGEWVKSYGAKGLA
WTRLASGGETSSYEKFLAPEEAAAVRKALGAEAGDVLFLVASGENKVVFDSLGALRKELA
GRFGLIDDSKPCLLWVTDFPLFEYSKEENRFVAMHHPFTMPREEDLGKLESDPGSVLAIA
YDMVLNGNELGGGSVRINRPDIQERMFQALGFTPEQAQERFGFLIDAFRYGAPPHAGMAF
GLDRLVMLMLGCDSIRDVIAFPKVASSAELMSSAPTGVDPKQLEELGISLLKKD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccggaatcattaacgggcctgaaacgaaccaactactgcggggagctgcgcgcggcc
gactgcggcagggaagtgaccgtctgcggatgggtgcagcgccagcgcgacctggggcag
ctgatttttatcgatttaagggaccgtaccggaatcgttcagctcgcattcggcgacaag
acggaccgcgaggtgtttcaaaaggcctttgccgcccgcgcggagttcgttctggcggcg
cgcggaaccgtgagggagcgctctgccaagaacgcggagctgccgacgggcgacattgaa
atcgaggtcgaggagctgcgcgtgcttgccaaaagcgagaccccgccgttcgccattgag
gaaaagaccgacgtcaaggaggatctgcgcctgaaataccgctatctggacctgcgccgc
ccggagatgcagagaaagatcatcggccggcaccgcatcgtcaaggctgcgcgcgattat
tttgacgaaaacggcttcctcgaaatcgagacgccgaacctgatcaaatccacgccggag
ggcgcgcgcgactatctggttccttcccgtatgttcccgggcagctttttcgcgctgcct
cagtcgccgcagctttataagcagcttctgatgctttcgggctacgaccgttacatgcag
gttgcccgctgcttccgcgacgaggacctgcgcgccgaccgccagccggaatttacgcag
atcgactttgagatgtcgtttgtttctcaggacgacgtgatggcgatcgcggagggattt
atcaaggacgtctatcaaaaagtattgggtcttgaaatccggactccgctgcgccgcatg
acctggcaggaggcgatgaaccgcttcggctccgacaagcctgatttgcgcttcggcatg
gagttgacagacgtgagcgaagccctgaaaaacacggaattccgcgtgttcgccggtgct
ctgtccgcgggcggcagcgtgcgcggcatcaatctgaagaggcaggcggacgctttaagc
cgcaaggagatcgacaagctgggagagtgggtcaaatcctacggagcaaagggccttgcg
tggacacgtcttgcctccggcggggaaacctcctcctatgaaaaattcctcgctccggaa
gaagcggcggccgttcgaaaggcgctgggcgccgaagcgggcgacgtgctgttcctggtc
gcgagcggcgaaaacaaagttgtgttcgattccctcggcgcgctgcgcaaagagcttgcc
gggcggttcggactgatcgacgactcgaagccctgtcttctttgggtgacggacttcccg
ctgttcgagtacagcaaggaagaaaaccgctttgtcgcgatgcaccacccgttcaccatg
ccgcgcgaggaggatctcggcaagctggagtccgaccccggcagcgtgctggcgatcgcc
tacgatatggtgctcaacggaaacgagctcggcggcggctcggtccgtatcaatcggccg
gacatccaggagagaatgttccaggccctcggctttacccccgagcaggcgcaggagcgc
ttcggctttttgatcgacgcgttccgctacggcgcgccgccgcacgccggcatggcgttc
ggcctggaccgcctggtcatgctgatgctcggctgcgacagcatccgcgacgttatcgcg
ttcccgaaggtcgcttcctccgcggagctgatgagcagcgccccgaccggagtcgacccg
aagcagcttgaagagctgggcatatccttgctgaaaaaggattaa
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