Cellulomonas fengjieae: KG102_00445
Help
Entry
KG102_00445 CDS
T08576
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
cfen
Cellulomonas fengjieae
Brite
KEGG Orthology (KO) [BR:
cfen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfen03019
]
KG102_00445 (hrpA)
Enzymes [BR:
cfen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KG102_00445 (hrpA)
Messenger RNA biogenesis [BR:
cfen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KG102_00445 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
NACHT
Zeta_toxin
PhoH
T2SSE
SRP54
TsaE
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QVI66141
LinkDB
All DBs
Position
complement(87083..91258)
Genome browser
AA seq
1391 aa
AA seq
DB search
MSLPSPSPVDPPGSGSGRPPRRRVRGRRKPAAAVAEQPTQPGQRPPARRAPGRDDPARTA
ARRARAAEVRRAVDLPPITYPEQLPVSARRAEISDALRDHQVVVVAGETGSGKTTQIPKI
ALELGRGRAGQIGHTQPRRIAARSVAERINEELVGDVPLGGVVGYQVRFTDESSESTLVK
VMTDGILLAQIQRDPMLWAYDTLIIDEAHERSLNIDFILGYLTRLLPQRPDLKVVITSAT
IDSDRFARHFASADGEPAPVVEVTGRTYPVEIRYRPLSPDVEEGAPVKKRAADDRDPMTA
ICEAVDELCLEGPGDILVFLSGEREIRDAEEALRSSLGVRATDPRSPGAVELLPLYSRLS
AAEQHRVFERHQNRRVVLSTNVAETSLTVPGIRYVIDPGTARISRYSKATKVQRLPIEPI
SQASANQRSGRCGRVADGIAIRLYSQEDFESRPLYTEPEILRTSLASVILQMISVGVATT
PEDIGDFPFVDPPDTRAIRDGVQLLTELGALGEGRLTDTGRALAQLPMDPRLARMIVEGG
RRGVAREVMIIAAALSIQDPRERPVEEREKADLSHSRFTDPTSDLLTYLNLWHYLRDQQR
DLSGSAFRRMCRSEHLNYLRIREWQDVVAQLRELAKPLGIVMNAPRPAAEDDGLQLEWDG
DRIHVAILSGLLSQIGMQEATEVSTQSKGRAQGRPDRRGRNEYLGARGVRFAIWPGSGMA
RKPPAWIMAAELVETSRLWGRDVARIQPEWAEEVGAHLVKRTYSEPAWSTKQGAATAFEK
VLLYGVPIVNQRRVLYARVDPEHARELFIRHALVQGEWTTHHQFFHENRRLLAEAEGLEA
RARRRDLVVDDDTLFAFYDERIPDDVVSSRHFDQWWKRARRDDPDLLTFTRELLVGEAGA
IDESAFPSRWPQGDLRLPLTYQFEPGTEADGVTVHIPLSTLARLTPDGFGWMVPGLREEL
VTATIRSLPKPVRVQLVPAPDVARGVMAWMDEHTAGWEDTVRAGDAAPSFREVFRRAVRE
LRGVDVPEDAFDDDRLPPHLRMTFRVVGDRGGVVDEGKDLLVLQRRLADRTQQAVDDAVR
TAVRAAMEEARKAAPAAPAPTAVPPAPAIDVERTGLTTWPADLPELPEVVEVGRVRAFPS
LVDETRSVAVRARADESAVPEASRLGLRRLLLLDVGLATGRITSRWTGTQALTLAASPYP
NTQALVTDVQLAAIEHLVTVPPQSVRTAEAYRSLRGTVQGRLEDTVFTVVSDLVAVLTAW
RELDAEIRARSSLALLATAQDVRAQAARLVHDGFVSEVGAARLPQLTRYLRAARHRLVKA
ADNPQRDADLAWQVHDVEALYDEVAARRAGDAALTDLRWMLEELRVSLFAQQLGTPVPVS
TTRIKKALSAY
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgccgtccccctcccccgtcgacccgcccgggtccgggtcggggcgacccccg
agacgccgggtccgcgggcgccgcaagccggccgccgccgtcgccgagcagccgacgcag
ccgggccagcgaccgccggctcgccgtgctccgggtcgcgacgaccccgcccgcacggcc
gcccgccgtgcgcgtgccgccgaggtgcgccgggccgtcgaccttccgccgatcacctac
ccggagcagctgcccgtcagcgcgcgacgggcagagatcagcgacgcgctgcgcgaccac
caggtcgtcgtcgtcgcaggcgagaccggctccggcaagaccacgcagatccccaagatc
gcgctcgagctcgggcggggccgcgccggccagatcgggcacacgcagccgcgtcggatc
gccgcgcgcagcgtcgcggagcggatcaacgaggagctcgtcggggacgtgcccctgggt
ggggtcgtcggctaccaggtgcggttcaccgacgagtcgagcgagtccacgctggtcaag
gtcatgaccgacggcatcctgctggcccagatccagcgcgacccgatgctgtgggcatac
gacacgctgatcatcgacgaggcccacgagcgctcgctcaacatcgacttcatcctcggg
tacctcacccggctgctcccgcagcgaccggacctcaaggtcgtcatcacgtcggcgacg
atcgactccgaccggttcgcgcggcacttcgcctcggccgacggggagccggcgccggtc
gtcgaggtcaccgggcggacgtacccggtcgagatccgctaccgcccgctgtcgccggac
gtcgaggagggcgcgccggtcaagaaacgagcggcggacgaccgcgacccgatgacggcc
atctgcgaggcggtcgacgagctctgcctggaggggcccggcgacatcctggtcttcctg
tccggcgagcgggagatccgcgacgccgaggaggccctccgctcgtcgctgggcgtgcgg
gccaccgacccgcgcagccccggcgcggtcgagctcctcccgctgtacagccggctgtcc
gccgccgagcagcaccgggtgttcgagcggcaccagaaccgccgcgtggtgctgtccacc
aacgtcgccgagacgtcgctgaccgtccccggcatccggtacgtgatcgacccgggcacg
gcccgcatctcccggtactccaaggccaccaaggtgcagcggctgcccatcgagccgatc
tcgcaggcctcggccaaccagcgttcgggccggtgcgggcgcgtcgcggacggcatcgcc
atccgcctgtactcgcaggaggacttcgagtcccgcccgctgtacacggagccggagatc
ctgcgcacctcgctggcgtcggtgatcctgcagatgatctcggtgggcgtcgcgacgacc
ccggaggacatcggcgacttcccgttcgtcgacccgcccgacacccgggccatccgggac
ggcgtccagctgctgacggagctgggcgcgctcggggagggccggctgaccgacaccggc
cgcgccctggcgcagctgccgatggacccgcggctggcgcgcatgatcgtcgagggcggg
cgccggggcgtggcacgcgaggtcatgatcatcgccgccgccctgtccatccaggacccg
cgcgagcgaccggtcgaggagcgcgagaaggccgacctgtcgcactcgcggttcaccgac
ccgacctccgacctgctcacgtacctgaacctgtggcactacctgcgcgaccagcagcgg
gacctgtcgggctcggcgttccggcggatgtgccgttcggagcacctcaactacctgcgg
atccgcgagtggcaggacgtggtcgcccagctgcgcgagctggccaagcccctgggcatc
gtgatgaacgcaccgcgtccggcggccgaggacgacggcctgcagctggagtgggacggc
gaccggatccacgtggcgatcctgtcggggctgctctcgcagatcgggatgcaggaggcg
accgaggtctcgacgcagtccaagggccgggcgcagggccgccccgaccggcgcggccgc
aacgagtacctgggcgcccgcggcgtgcggttcgcgatctggcccgggtcgggcatggcc
cgcaagccgccggcctggatcatggccgccgagctcgtcgagacctcccggctgtggggg
cgcgacgtcgcccggatccagcccgagtgggccgaggaggtcggcgcccacctggtcaag
cgcacgtactccgagccggcctggtccaccaagcagggtgcggcgaccgcgttcgagaag
gtcctgctgtacggcgtcccgatcgtcaaccagcgccgggtcctgtacgccagggtcgac
cccgagcacgcccgcgagctgttcatccggcacgcgctggtgcagggcgagtggaccacg
caccaccagttcttccacgagaaccggcgcctgctggccgaggcggagggtctggaggcg
cgggcgcgccgtcgcgacctggtggtcgacgacgacacgctgttcgcgttctacgacgag
cggatccccgacgacgtcgtctccagccggcacttcgaccagtggtggaagcgggcccgg
cgcgacgaccccgacctgctgacgttcacgcgcgagctcctggtgggtgaggccggcgcg
atcgacgagtcggcgttcccgtcgcgctggccgcagggtgacctgcgcctgccgctgacc
taccagttcgagccgggcacagaggcggacggcgtgaccgtgcacatcccgctgtcgacg
ctcgcgcgtctcacgcccgacggcttcgggtggatggtgccgggcctgcgcgaggagctc
gtgacggcgacgatccgctcgctgcccaagccggtccgcgtgcagctggtccccgcaccc
gacgtggcgcgcggtgtcatggcctggatggacgagcacacggccggctgggaggacacg
gtgcgcgcgggcgacgccgcgccgtcgttccgcgaggtgttccgccgggccgtgcgcgag
ctgcgcggcgtcgacgtgccggaggacgccttcgacgacgaccgcctgcccccgcacctg
cggatgacgttccgcgtggtcggcgaccgcgggggagtggtggacgagggcaaggacctg
ctcgtgctccagcgccggctggccgaccgcacccagcaggcggtcgacgacgcggtgcgc
accgcggtccgggcggcgatggaggaggcgcgcaaggccgcgcccgcagccccggctccg
accgccgtgccgcctgcgcccgcgatcgacgtcgagcgcaccggcctgaccacgtggccc
gcggacctgcccgagctcccggaggtcgtcgaggtcggtcgcgtccgggccttcccgtcg
ctggtcgacgagacgcggtcggtcgccgtgcgtgcccgcgccgacgagtcggccgtcccg
gaggcgtcgcggctgggcctgcgtcgcctgctcctgctcgacgtcggcctggcgaccggc
cgcatcacctcccggtggaccgggacgcaggccctgaccctggccgcgagcccctacccg
aacacgcaggccctggtcacggatgtgcagctggccgccatcgagcacctggtgaccgtg
cctccccagagcgtccgcaccgcggaggcgtaccggtccctgcgcggcaccgtgcaggga
cggctcgaggacacggtcttcaccgtggtctcggacctcgtcgccgtgctgaccgcctgg
cgcgagctcgatgccgagatccgggcccggtccagcctcgcgctgctcgccacggcgcag
gacgtccgcgcgcaggccgcccgtctcgtgcacgacggtttcgtcagcgaggtcggggca
gcccgcctcccgcagctgacccggtacctgcgggccgcccgccaccggctggtcaaggcc
gcggacaacccccagcgcgacgccgacctggcgtggcaggtgcacgacgtcgaggcgctc
tacgacgaggtcgccgcccgtcgcgcgggcgacgccgcgctgaccgacctccggtggatg
ctcgaggagctgcgggtcagcctgttcgcccagcagctgggcaccccggtgcccgtgtcg
accacccgcatcaagaaggccctcagcgcgtactga
DBGET
integrated database retrieval system
