Cellulomonas fengjieae: KG102_03935
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Entry
KG102_03935 CDS
T08576
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cfen
Cellulomonas fengjieae
Pathway
cfen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KG102_03935 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfen03021
]
KG102_03935 (rho)
03019 Messenger RNA biogenesis [BR:
cfen03019
]
KG102_03935 (rho)
Transcription machinery [BR:
cfen03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KG102_03935 (rho)
Messenger RNA biogenesis [BR:
cfen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KG102_03935 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
FANC_SAP
Spore_III_AA
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
QVI66754
LinkDB
All DBs
Position
855010..857124
Genome browser
AA seq
704 aa
AA seq
DB search
MTDTIEPAVSSSGGARSTGISALRLPELQAMASQLGVKGTSKMRKGDLVQAISDARGTSR
PAVKEPRREQDRAQSQDRTQSQDGTPSQDGTQGAPVGDGPPARTGRTRTRAPQLDLEVDL
GAPKKDRTAQDRTAQDRTEQDQPTQDRGPRAPRGDALAGLEAALDAKLAPVEQRDDRAAR
AADAVGAVTGERRSRRAGRGAGAPQVDDADRAPVGGRQRDGQSERPQRDAEQRDGQQRDG
QPRDGQQRGTQQDTRQQTGTPPQANQPRRDQDDDGFDERGGRRRRSRDRFRDRDRDRKGR
GTRGRAGAGDIAGLDDIEVSDDDVLLPVAGILDLMDSYAFVRTTGYLPSANDVYVSLNQV
KRYGLRRGDAVTGAVRQPREGEQPSQGNRPSKFNALVRLDSINGLEPDSARVRPEFNKLT
PLYPQERLRLESDQNKLSPRVIDIVAPIGKGQRGLIVAPPKAGKTIIMQQIANAITTNNP
EVHLMVVLVDERPEEVTDMERTVKGEVIASTFDRPASDHTIVAELAIERAKRLVELGQDV
VVLLDSLTRLSRAYNLAAPASGRILSGGVDASALYPPKRFFGAARNIEHGGSLTILASAL
VETGSKMDEVIFEEFKGTGNMELRLSRGLADKRIFPAVDVNASGTRREEILMPHDELKII
YKLRRVMGALDQTQAIELLIGKLKETKSNVEFLLQVQKTTPGSE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacaccatcgagcccgccgtgagcagctccggcggcgcccgcagcaccggcatc
tcggcgctgcgcctgcctgagctgcaagccatggcgtcccagctgggcgtcaagggcacc
tccaagatgcgcaagggcgacctcgtccaggccatctcggacgcgcgcggcacctccagg
cccgcggtcaaggagcctcgccgcgagcaggaccgcgcgcagagccaggaccgcacgcag
agccaggacggcacgccgagccaggacggcacgcagggcgcccccgtcggcgacgggccg
ccggcgcgcaccggccggacccgcacccgggctccgcagctcgacctcgaggtcgacctc
ggcgccccgaagaaggaccggaccgcacaggaccggaccgcacaggaccggaccgagcag
gaccagcccacgcaggaccgcggccctcgtgcgccgcgcggcgacgcgctggccggcctc
gaggccgctctggacgccaagctcgcccccgtggagcagcgcgacgaccgcgccgcgcgt
gcggccgacgccgtcggtgccgtgaccggggagcgtcgctcgcgtcgcgccggtcgtggt
gccggtgcgccgcaggtcgacgacgccgaccgcgcgcccgtcggcggccggcagcgtgac
ggccagtcggagcgcccgcagcgtgacgccgagcagcgtgacggccagcagcgcgacggc
cagccccgtgacggccagcagcgcggcacccagcaggacacccgccagcagaccggcacc
ccgccgcaggccaaccagccccgccgggaccaggacgacgacggcttcgacgagcgcggc
ggacgccgtcggcgctcgcgggaccgcttccgcgaccgtgaccgggaccgcaagggtcgc
gggacccgcggccgcgcgggcgccggtgacatcgccgggctcgacgacatcgaggtcagc
gacgacgacgtgctgctgcccgtcgccggcatcctcgacctgatggacagctatgcgttc
gtgcgcaccacgggctacctgcccagcgccaacgacgtgtacgtgtccctgaaccaggtc
aagcggtacggcctgcgccgcggcgacgccgtgacgggtgccgtccgtcagccgcgcgag
ggcgagcagccctcgcagggcaaccggccgagcaagttcaacgcgctggtccggctggac
tcgatcaacggcctcgagccggacagcgcccgcgtgcgccccgagttcaacaagctgacg
cccctctacccgcaggagcgcctgcgcctcgagagcgaccagaacaagctgtcgccccgc
gtcatcgacatcgtggcgcccatcggcaagggccagcgcggcctcatcgtcgcgcccccc
aaggcgggcaagacgatcatcatgcagcagatcgcgaacgcgatcacgaccaacaacccc
gaggtccacctcatggtcgtgctcgtcgacgagcgccccgaagaggtcacggacatggag
cgcacggtcaagggtgaggtcatcgcctcgaccttcgaccgccccgcctccgaccacacg
atcgtcgccgagctcgccatcgagcgcgccaagcggctggtcgagctgggccaggacgtc
gtcgtgctgctcgactcgctgacccgcctctcgcgggcctacaacctggccgcccccgcg
tccgggcgcatcctgtcgggcggtgtcgacgcctcggcgctgtacccgcccaagcggttc
ttcggcgcggcccgcaacatcgagcacggcggctccctgacgatcctcgcgtcggcgctg
gtggagaccggctccaagatggacgaggtcatcttcgaggagttcaagggcaccgggaac
atggagctccggctgtcccgtggcctggcggacaagcgcatcttccccgcggtcgacgtc
aacgcgtcgggcacccgccgcgaggagatcctcatgccgcacgacgagctgaagatcatc
tacaagctccgtcgcgtgatgggtgcgctcgaccagacgcaggccatcgagctgctcatc
ggcaagctcaaggagaccaagtcgaacgtcgagttcctgctgcaggtgcagaagacgacg
cccggcagcgagtag
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