Cellulomonas fengjieae: KG102_08960
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Entry
KG102_08960 CDS
T08576
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cfen
Cellulomonas fengjieae
Pathway
cfen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KG102_08960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfen03019
]
KG102_08960
03009 Ribosome biogenesis [BR:
cfen03009
]
KG102_08960
Enzymes [BR:
cfen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KG102_08960
Messenger RNA biogenesis [BR:
cfen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KG102_08960
Ribosome biogenesis [BR:
cfen03009
]
Prokaryotic type
rRNA helicases
KG102_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QVI67663
LinkDB
All DBs
Position
complement(1932345..1934123)
Genome browser
AA seq
592 aa
AA seq
DB search
MSSAMPSALPAEALVDATFADLGLPPALDAAIVDLGFTVPSAIQLQAVPALLSGRDIVGV
AQTGTGKTAAFGLPLLASIDYDLPAVQAIVLTPTRELAMQVADAIQSFATHLPGLNVLAV
YGGSPFLPQQRALARGAQVVVGTPGRVLDHLERRTLKLDQVRFLVLDEADEMLRMGFAED
VDKVLSAAPRERQVALFSATMPPQIRRVAEQHLNRPVEITVSRQASTVTSVRQTYAVVPH
RHKTGALARVLAVSDADAAIVFVRTRGAAEEVGSALIERGISAAYISGDVAQTEREKIVD
RLRTGALDVLVATDVAARGLDVDRIGLVVNFDVPREPEIYVHRIGRTGRAGREGEALSFV
TPSEQSRLRQIERTTRQSLLQVDIPSPAEVSAHRVHALLARTGARAELDRLDLYREAIAV
HLAQNPDVDPVDLLAVVTALAVGDEGPVAVRQGDDLDDALSRAHLTGGNDRSDRGDRPDR
PERGERRRADSHVAGGSPRWRVAVGHRDGLQPGALVGALTGEGGLTGKDVGKIDIFGSFA
LVDIPDGLSADVIDRLARTRVAGRPLRIRLDAGPRPGHGASRPAHGPARGRS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgccatgccctctgccctgcccgccgaggctctcgtcgacgcgacgttcgcc
gacctcggtctgccgccggccctcgacgccgcgatcgtcgacctcggcttcaccgtcccg
tccgccatccagctgcaggccgtgcccgcgctgctcagcggccgtgacatcgtcggcgtc
gcccagaccggtaccggcaagacggccgcgttcggcctgccgctgctggcctcgatcgac
tacgacctgccggccgtgcaggccatcgtcctgaccccgacgcgcgagctcgcgatgcag
gtggccgacgccatccagtcgttcgccacccaccttcccggcctgaacgtgctggcggtc
tacggcggttcgccgttcctcccgcagcagcgtgcgctcgcccgtggcgcccaggtggtc
gtcgggacccccggccgcgtcctggaccacctcgaacgccggacgctgaagctcgaccag
gtccggttcctggtgctcgacgaggccgacgagatgctgcgcatgggcttcgccgaggac
gtcgacaaggtcctgtccgcggcgccgcgcgagcgccaggtggccctcttctccgcgacg
atgcccccgcagatccgccgtgtcgccgagcagcacctgaaccgcccggtcgagatcacg
gtctcgcgccaggcgtcgaccgtgacgagcgtgcgccagacgtacgccgtggtcccgcac
cgccacaagaccggagcgctcgctcgcgtgctcgccgtctccgacgccgacgccgcgatc
gtgttcgtccgcacccgcggtgcggccgaggaggtcggcagcgcgctgatcgagcgcggc
atctccgcggcgtacatctccggggacgtcgcccagaccgagcgcgagaagatcgtcgac
cgactgcgcaccggcgcgctcgacgtcctcgtcgccaccgacgtcgccgcccgtgggctc
gacgtcgaccgcatcggcctcgtcgtcaacttcgacgtgccgcgcgagcccgagatctac
gtgcaccgcatcggccgcacgggccgcgccggccgcgagggtgaggcgctgtcgttcgtc
acgccgtccgagcagtcgcgcctgcgccagatcgagcggacgacgcgtcagtcgctcctg
caggtcgacatcccgtcgccggcggaggtctccgcacaccgggtgcacgccctgctggcc
cgcaccggcgcccgcgccgagctggaccgcctggacctgtaccgcgaggccatcgcggtg
cacctggcgcagaaccccgacgtcgacccggtggacctgctggcggtcgtgaccgcgctc
gccgtgggtgacgagggtccggtggccgtccggcagggagacgacctcgacgacgccctg
tcgcgcgcccacctgaccggtggcaacgaccgcagcgaccgcggtgaccggccggaccgg
ccggagcgcggcgagcgccgtcgcgccgactcccacgtcgccggcgggtcgccccgctgg
cgcgtcgcggtgggccaccgcgacggcctgcagccgggtgccctggtcggcgcgctgacc
ggtgagggcgggctgaccggcaaggacgtcggcaagatcgacatcttcggcagcttcgcg
ctcgtcgacatcccggacgggctgtccgccgacgtgatcgaccggctggcgcgcacccgc
gtcgccgggcgcccgctgcgcatccgcctcgacgcgggcccgcgcccgggccacggcgct
tcccggcccgcgcacggcccggcccgcggccgcagctga
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