Cellulomonas fengjieae: KG102_13475
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Entry
KG102_13475 CDS
T08576
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cfen
Cellulomonas fengjieae
Pathway
cfen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KG102_13475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfen03021
]
KG102_13475
03400 DNA repair and recombination proteins [BR:
cfen03400
]
KG102_13475
Enzymes [BR:
cfen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KG102_13475
Transcription machinery [BR:
cfen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KG102_13475
DNA repair and recombination proteins [BR:
cfen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KG102_13475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Ins145_P3_rec
Cluap1
Motif
Other DBs
NCBI-ProteinID:
QVI65137
LinkDB
All DBs
Position
complement(2920417..2924286)
Genome browser
AA seq
1289 aa
AA seq
DB search
MLDVNVFDELRIGLASADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDVDGRHEDLPNLQNGIDLEKKEISDRRDNDINTRASKLEAD
LAELEAEGAKADARRKVRDSAEREMAQIRKRADAELDRLDQVWDRFKNLKVADLEGDEML
YRQLQDRYGNYFEGSMGAAAIQKRLEAFDLEAESDALREIIKTGKGQRKTRALKRLKVVN
AFLTTTNSPTGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTNDKDEALGAGR
SFSTVSEAIMAFDQGSLDLNAVVKIRFDDLVLTEEDAPEGWTEGEPIVFETTLGRALFNE
LLPVDYPYENGVVDKKRLSVIVNDLAERYPKVEVAASLDALKEAGFRWATRSGVTISISD
VATPSAKAAILEEHEGRAAKVQGQYEKGLITDDERRQELIEIWTQATDKVAKAMQENFPR
QNTVYKMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTERGLTMPIGVPGTDGTLRRHDK
VETSVYSRTLATDVEIDGEVIGHAGDDVGDVLLDRLLEAGVTEMKIRSVLTCESRVGTCA
RCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQEL
FEARTPKGEAPIAEFSGRIAVEEGDRSRRLVLTPDDGSEEIAYPITKRSRLLVSDGDHVS
VGTQLVVGAVDPKKVLRILGPRATQKHLVDEVQVVYSSQGVDIHDKHIEVIVRQMLRRVT
VLDSGTTDLLPGELAERGRFEDANRAAVSEGGQPASGRPELMGITKASLATDSWLSAASF
QETTRVLTEAAMSGRSDPLLGLKENVILGKLIPAGTGLPRYGNIAVEPTEEAKAELYPTF
GYDEIDFPALGLGSGEAIPLEDIDFGDYR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgtatcggccttgcctcggccgacgacatc
cgtacctggtcgcacggcgaggtgaagaagcccgagaccatcaactaccggaccctgaag
ccggagaaggatggcctgttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctcgaaggtccgtcgtgagcgcatgggccacatcgagctcgccgcgccc
gtgacgcacatctggttcttcaagggtgtgccctcgcgtctcggctacctgctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcacctgggtcgac
gtcgacggccggcacgaggacctccccaacctccagaacgggatcgacctggagaagaag
gagatctcggaccgccgcgacaacgacatcaacacccgcgcgtccaagctcgaggccgac
ctggccgagctcgaggccgagggtgccaaggccgacgcccgccgcaaggtgcgcgactcg
gccgagcgcgagatggcgcagatccgcaagcgcgccgacgccgagctcgaccgcctggac
caggtctgggaccggttcaagaacctcaaggtcgcagacctcgagggcgacgagatgctc
taccgccagctccaggaccggtacggcaactacttcgagggctcgatgggcgccgcggcg
atccagaagcgtctcgaggcgttcgacctcgaggccgagtccgacgcgctgcgcgagatc
atcaagaccggcaagggccagcgcaagacgcgtgccctgaagcggctcaaggtcgtcaac
gcgttcctcacgacgaccaactcgcccaccggcatggtgctcgacgccgtcccggtcatc
ccgccggacctgcgtccgatggtccagctcgacggtggccggttcgccacctcggacctg
aacgacctgtaccgccgcgtgatcaaccggaacaaccgcctcaagcggctgctcgacctg
ggcgcgccggagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgactcg
ctgttcgacaacggccgccgtggccgtccggtgaccggtccgggcaaccgcccgctcaag
tccatctcggacatgctcaagggcaagcagggtcggttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgccgaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgtctc
gtggacctcaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgtgcccgt
ccggtcgtgtgggacgtcctcgaagaggtcatcaccgagcaccccgtgctgctcaaccgt
gcgcccacgctgcaccgtctgggtatccaggcgttcgagccccagctggtcgagggcaag
gcgatccacctgcacccgctcgtctgcgccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgcccctgagcgccgaggcgcaggccgaggcccgcatcctcatgctc
tcgagcaacaacatcctcaagccgtcggacggtcgtccggtgaccatgccctcgcaggac
atgatcatcggtctgtaccacctgacgaacgacaaggacgaggcgctcggggccggccgt
tcgttcagcacggtctccgaggcgatcatggcgttcgaccagggttccctggacctgaac
gccgtcgtcaagatccgcttcgacgacctggtcctgaccgaggaggacgcacccgagggc
tggaccgagggtgagcccatcgtgttcgagaccaccctgggccgcgcgctgttcaacgag
ctgctcccggtggactacccgtacgagaacggcgtcgtcgacaagaagcgcctctcggtc
atcgtcaacgacctggccgagcggtaccccaaggtcgaggtcgctgcctcgctggacgcg
ctcaaggaggccggcttccgctgggccacccgttcgggcgtcacgatctccatctcggac
gtcgcgactccgtcggccaaggcggccatcctcgaggagcacgagggccgcgcggcgaag
gtgcagggccagtacgagaagggcctgatcaccgacgacgagcgccgtcaggagctcatc
gagatctggacgcaggccaccgacaaggtcgccaaggcgatgcaggagaacttcccgcgc
cagaacaccgtctacaagatggtcggctcgggtgcgcgcggtaactggatgcaggtgcgc
cagatcgccggtatgcgtggcctcgtcgccaacccgaagggcgagatcatccctcgcccg
atcaagtcgaactaccgcgaggggctgtcggtcctcgagtacttcatcgcgacgcacggt
gcccgcaagggtctggcggacaccgctctgcggaccgccgactcgggctacctgacccgt
cgtctggtggacgtctcgcaggacgtcatcgtccgcgaggacgactgcggcaccgagcgt
ggtctgaccatgccgatcggggtccccgggacggacggcacgctgcgtcgtcacgacaag
gtcgagacgagcgtctactcgcgcacgctggcgacggacgtcgagatcgacggcgaggtc
atcggccacgccggtgacgacgtcggcgacgtgctgctggaccgcctcctcgaggcgggc
gtgaccgagatgaagatccgctcggtcctcacctgcgagtcccgcgtcggcacgtgcgcg
cgctgctacggccgttcgctggccaccggcaagctcgtcgacatcggcgaggccgtcggc
atcatcgcggcccagtcgatcggtgagcccggcacgcagctcacgatgcgtaccttccac
accggtggtgtggcgtcggccgacgacatcacgcagggtctgccccgtgtccaggagctc
ttcgaggcccgcacccccaagggtgaggcgcccatcgcggagttctccggtcgcatcgcg
gtggaggagggcgaccgttcgcgtcgtctcgtcctgacgcccgacgacggctcggaggag
atcgcctacccgatcaccaagcgttcgcgcctgctggtctcggacggcgaccacgtctcc
gtgggtacgcagctcgtcgtgggtgcggtcgaccccaagaaggtcctgcgcatcctcggc
ccgcgtgccacgcagaagcacctggtcgacgaggtgcaggtcgtctactcctcccagggt
gtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcggcgcgtgacg
gtcctcgactccggcacgaccgacctgctgcccggcgagctcgccgagcgcgggcgcttc
gaggacgcgaaccgcgctgcggtgtccgagggcggtcagccggcgtcgggtcgcccggag
ctcatgggcatcacgaaggcgtcgctcgcgacggactcgtggctgtcggcggcctccttc
caggagaccacccgggtgctcaccgaggccgcgatgtcgggtcggtccgacccgctgctc
ggcctcaaggagaacgtcatcctcggaaagctcatcccggccggaacgggtctgccccgc
tacggcaacatcgcggtcgagcccaccgaggaggccaaggccgagctgtacccgaccttc
ggctacgacgagatcgacttccccgccctgggcctcggctccggcgaggcgatcccgctc
gaggacatcgacttcggcgactaccgctag
DBGET
integrated database retrieval system
