Cellulomonas fengjieae: KG102_13630
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Entry
KG102_13630 CDS
T08576
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cfen
Cellulomonas fengjieae
Pathway
cfen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KG102_13630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfen03019
]
KG102_13630
03400 DNA repair and recombination proteins [BR:
cfen03400
]
KG102_13630
Enzymes [BR:
cfen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KG102_13630
Messenger RNA biogenesis [BR:
cfen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KG102_13630
DNA repair and recombination proteins [BR:
cfen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KG102_13630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QVI65164
LinkDB
All DBs
Position
complement(2951925..2954030)
Genome browser
AA seq
701 aa
AA seq
DB search
MPDTTRDTTHESALAVLRRLVGNPAADFHEGQFEAIETLVDDRRRALVVQRTGWGKSAVY
FVATMLLRERGAGPTVLVSPLLALMRDQVAAAERAGVRAVAINSTNAHEWDDLLARLAAD
EVDVLLVSPERLNNPAFRENQLPALVRRLGLLVVDEAHCISDWGHDFRPDYRRLRDLIAT
MPDGVPVLATTATANSRVVADVAEQLGSGDAQDVLTIRGPLARASLRLGVLRLPTAKARL
GWLLSHLADLPGSGIIYTLTVAAAQDTARLLREAGHDVRAYTGQTDPAEREDAEAALKAN
RVKALVATSALGMGFDKPDLGFVLHLGAPSSPVSYYQQVGRAGRATESADVLLLPGPEDR
DIWQYFATASMPDEDRAQRVIAELNDRPLSTPALEARVDLRRTPLELLLKVLDVDGAVRR
VQGGWVATGQPWTYDAERYARIAAARQAEQEHMLEYERTTGCRMEFLQRSLDDETATPCG
RCDSCAGVWYPTDVVEDAAASAERSLDRVGVPIEPRAQWPVGADRLGLPVRGKIAESERA
GEGRALARLTDLGWGTALREVFAAGATDAPVTPAMLAGCVRVLAQWGWDERPTAVVALPS
RRRPLLVDSLARGLAEIGRLPYAGALALRDGGPSGEPGGNSAFRLAGVWGRFDASALDLP
PGPVLLVDDLVDSRWTMTVAAREVRLAGASGVLPFALALRG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgccagataccacccgcgacaccacccacgagtcagcactcgccgtcctgcgccggctg
gtgggcaaccccgccgccgacttccacgagggccagttcgaggccatcgagacgctcgtg
gacgaccgtcgccgcgcgctcgtcgtgcagcgcaccgggtggggcaagtcggcggtgtac
ttcgtcgccaccatgctgctgcgtgagcgcggtgccgggccgacggtgctcgtctcgccg
ctgctggcgctgatgcgcgaccaggtcgccgccgccgagcgtgccggggtccgcgccgtg
gccatcaactcgaccaacgcccacgagtgggacgacctgctggcgcgtctggccgccgac
gaggtggacgtgctgctcgtctcgcccgagcggctgaacaaccccgccttccgggagaac
cagctgcccgccctggtgcggcgtctcggcctgctggtggtcgacgaggcgcactgcatc
agcgactggggccacgacttccggcccgactaccggcgcctgcgcgacctcatcgccacc
atgccggacggcgtgcccgtgctggcgaccacggcgaccgccaacagccgggtggtggcc
gacgtggccgagcagctcggcagcggtgacgcgcaggacgtgctgaccatccgcggcccg
ctcgctcgggcgtcgctgcgtctgggggtgctgcggctcccgaccgcgaaggcgcgcctg
ggctggctgctcagccacctggcggacctgcccggctccggcatcatctacacgctcacg
gtcgcggccgcccaggacaccgccaggctcctgcgcgaggccggccacgacgtgcgtgcg
tacaccggccagacggacccggccgagcgtgaggacgccgaggcggcgctcaaggcgaac
agggtgaaggcgctggtcgcgacgagcgcgctcggcatgggcttcgacaagcccgatctc
gggttcgtgctgcacctgggggcgccctcgtcgccggtgtcgtactaccagcaggtcggc
cgcgccggtcgcgcgacggagagcgctgacgtcctgctcctgcccgggcccgaggaccgc
gacatctggcagtatttcgcgaccgcgtccatgcccgacgaggaccgggcgcagcgcgtg
atcgcggagctgaacgaccggcccctgtcgacgcccgcgctcgaggcgcgggtcgacctc
cgccgcacgccgctggagctgctgctcaaggtcctcgacgtggacggggccgtgcgcagg
gtgcagggcggctgggtggccaccgggcagccgtggacctacgacgccgagcggtacgcc
cgcatcgccgcggcccgccaggccgagcaggagcacatgctcgagtacgagcgcaccacc
ggctgccggatggagttcctgcagcgcagcctggacgacgagacggccacgccgtgcggt
cgctgcgactcgtgcgcgggcgtctggtacccgaccgacgtcgtggaggacgcggcggcg
tcggccgagcgctcgctggaccgcgtcggggtgccgatcgagccgcgcgcgcagtggccc
gtgggcgcggaccgcctgggcctgcccgtgcgcggcaagatcgccgagtcggagcgggca
ggcgagggccgggcgctcgcgcggctgaccgacctgggctgggggacggccctgcgcgag
gtgttcgcggcgggcgccaccgatgcccccgtcaccccggccatgctggccggctgcgtg
cgcgtgctcgcgcagtggggctgggacgagcgtccgaccgcggtggtcgccctgccgtcg
cggcgccgaccgctgctcgtcgactccctcgcgcgcggtctggccgagatcggccggctg
ccctacgcgggggcccttgcgctccgggacggcgggccgagcggcgagccgggcggcaac
agtgccttccgcctggccggcgtgtggggccggttcgacgcgtcggcgctggacctgccg
ccgggcccggtgctgctcgtcgacgacctcgtggacagccgctggaccatgaccgtcgcc
gcgcgcgaggtgcggctggcgggcgcgtccggggtgctgccgttcgctctggcgctgcgc
ggctga
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