Clostridium fermenticellae: D4Z93_01165
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Entry
D4Z93_01165 CDS
T06956
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfer03400
]
D4Z93_01165 (radA)
DNA repair and recombination proteins [BR:
cfer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D4Z93_01165 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
ChlI
DnaB_C
Lon_C
AAA_16
nSTAND_NTPase5
AAA
AAA_14
ABC_tran
Rad51
AAA_22
GvpD_P-loop
nSTAND3
AAA_24
NTPase_1
Elong_Iki1
NB-ARC
ATPase_2
RecA_N
SLFN-g3_helicase
Zn_Ribbon_YjdM
TK
NACHT
divDNAB
AAA_29
KdpD
Viral_helicase1
ResIII
DUF7129
DZR
HypA
Motif
Other DBs
NCBI-ProteinID:
AYD39227
UniProt:
A0A386H0K7
LinkDB
All DBs
Position
238378..239733
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AA seq
451 aa
AA seq
DB search
MAKSKSVFVCQECGYESLKWLGKCPNCNTWNSMVEEVKEEKISTKQSVILNNEPRSIVSI
KSGEYERLDTGISELNRVLGGGIVKGSLTLISGAPGIGKSTLLLQAANNIAGRYGKVLYV
SGEESEEQIKMRGDRLNVLSKDLYVISETNMDKIKEHITNTNPVFVIIDSIQTLFKQSMT
SAPGSVSQVRQNSNDIMSIGKTQNIPFFIVAHITKQGELAGPRVLEHMVDTVLSFEGERT
QEFRILRTIKNRFGNTSEIGVFEMSQEGLKQILNPSAVFLEEAGFQKEGSIVIGVIEGTR
PILVEIQALVTETKAVMPRRTAVGVDNLRLNLILAVLEKKLRVYFYNCDVYVNVVGGLNI
EGTFGDLGLALALLSSVKSKAISLERLIVVGEIGLTGEVRPVTFCDRLVNEAEKMGFKNA
IIPYRNKDRIKNKNIDVISVSSLVEAINKVF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagcaaaagtgtttttgtttgtcaggagtgtggatatgaatcattaaagtgg
cttggaaaatgtcccaattgtaatacatggaacagtatggtggaagaagttaaagaagaa
aagatttctacgaagcagagtgtaattcttaataatgaaccacgtagtatagtaagtatt
aaatcaggtgaatatgaaagattagatactggaatatctgagttaaacagagttttagga
ggaggaatagttaaaggatctcttactttgatctcaggagcacctggaatagggaaatca
actcttcttctgcaggcagccaataacattgcgggtagatatggtaaagttctatatgta
tcaggagaagaatctgaggaacagataaaaatgcgtggagatagattaaatgttctatca
aaagacctttacgtaatttcagaaaccaatatggataaaataaaagaacatataacaaat
actaatcctgtatttgttattatagattcaatacaaacacttttcaaacaatcaatgact
tcagcgccgggaagtgtatctcaagtacggcaaaattcaaacgatattatgagtataggc
aaaactcagaatataccgttttttatagtagcacacataactaaacaaggagaattagca
ggacctagggttttagagcatatggttgatactgtactttcctttgaaggcgagagaact
caggaatttagaattcttagaacaataaaaaatcgttttggtaacactagtgaaattggt
gtatttgagatgtcgcaagagggccttaaacaaatattaaatccgtcagctgttttttta
gaagaagcgggctttcaaaaagaaggctctattgtaataggtgtaattgaaggaacaaga
ccaatacttgttgaaatacaagctcttgtaactgaaactaaggcagttatgccaagaaga
acggctgttggtgtggataatttacgacttaatttaatactagcagttttagaaaaaaaa
ttaagagtttacttctacaattgtgatgtttatgttaatgtagtaggaggattaaatata
gaaggaacatttggtgacctgggattggcattagctcttttgtcaagtgtaaagtcaaag
gctatttcacttgaaaggcttattgtagttggggagataggtcttacaggagaggttagg
cctgtgacattttgtgataggctggtaaatgaggcagaaaagatgggatttaaaaatgct
ataataccatacagaaataaggatagaataaaaaataagaatattgacgtcattagtgta
tcttccttggttgaagcaataaataaagttttttag
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