Clostridium fermenticellae: D4Z93_01455
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Entry
D4Z93_01455 CDS
T06956
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cfer
Clostridium fermenticellae
Pathway
cfer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D4Z93_01455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfer03021
]
D4Z93_01455
03400 DNA repair and recombination proteins [BR:
cfer03400
]
D4Z93_01455
Enzymes [BR:
cfer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D4Z93_01455
Transcription machinery [BR:
cfer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D4Z93_01455
DNA repair and recombination proteins [BR:
cfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D4Z93_01455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AYD39280
UniProt:
A0A386H0U8
LinkDB
All DBs
Position
280088..281035
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVETSEDGTYGKFVVEPLERGYGITLGNALRRILLSSLPGVAANNIKIDG
VLHEFSTVHGVKEDVAELILNIKCLALKMADDGPKTIYIDEQGPGEVTAGDIKTDGSVEI
INKDLHIATLDDDSRLYMEIQVNTGRGYVTQNKNKSEDMPIGTIAVDSIYTPIKRVNFVV
DNTRVGQITDYDKLSLEVWTNGTIMPDEAISLSAKILIEHFKLFMTLTDHANNVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERTMDDMMKVRNLGKKSLEEVQ
QKLEVLDLSLKQSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaagcccaaaatagaatgtgtagaaactagtgaagatggcacttat
ggtaaatttgtagttgaaccgttagaaagaggctatggtattactctcggtaatgcattg
aggagaattcttctttcctcgttgcctggagttgctgctaataatatcaagatagatgga
gtacttcatgaattctctacagttcatggagtaaaagaggatgttgctgagttaatattg
aatatcaaatgtctggctttaaagatggcagatgatggtcctaaaactatatatatagat
gaacaggggcctggtgaggttactgcaggagatataaaaacagatggatctgttgaaata
attaataaggatttacatatagccactttggatgacgatagtagattgtatatggaaatt
caggttaatacaggtaggggttatgttactcaaaataagaataagtcagaagatatgcct
ataggaactatagctgtagattcgatatatactcctattaaaagagttaactttgttgta
gataatacaagggttggccaaatcactgattatgataagttatctcttgaggtatggact
aatggtacaataatgccagatgaggctataagtctatcagctaagattttaatagaacat
tttaagctgttcatgactttaacagatcatgctaacaatgttgaaataatggtggaaaaa
gaagaagataaaaaagagaaagtcttagaaatgactattgaagaacttgatctttctgtt
agaagttataactgcttgaaaagagctggtataaatactgttcaggagttaacagagaga
actatggatgatatgatgaaggttagaaaccttggaaagaaatccttggaagaagttcaa
caaaagcttgaagtattggatttatcactaaaacagagtgaggaataa
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