Clostridium fermenticellae: D4Z93_01480
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Entry
D4Z93_01480 CDS
T06956
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfer03016
]
D4Z93_01480 (truA)
Enzymes [BR:
cfer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
D4Z93_01480 (truA)
Transfer RNA biogenesis [BR:
cfer03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D4Z93_01480 (truA)
Prokaryotic type
D4Z93_01480 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AYD39285
UniProt:
A0A386H148
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All DBs
Position
284071..284805
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AA seq
244 aa
AA seq
DB search
MRNIKLTLEYDGTNYAGWQRQTNAVTVEQKVEEAIEKLTGNHCEVIGSSRTDSGVHARAY
VCNFFTDSAIPENKLKGAINNFLPEDIVARECEEVSLDFHARFCSKGKRYIYTVFNGRQR
PVILRNYTYYYHRELNIENMKKAAKYLVGTYDFSAFKNKGSKPRNSIRTVTEVGIVKKGD
FVIFTVTGNAFLYNMVRIIVGTLLDVGCGRFEVDYIKYILDSKDRSKAGKSAPAAGLLLD
EVFY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatataaaacttacactcgaatatgatggaacaaattatgcgggatggcagaga
cagacaaatgcagttactgtagagcaaaaagtagaagaagctatagaaaaactcaccggg
aatcattgtgaagtaataggatcaagtagaacggattctggagtacatgccagggcatat
gtgtgtaacttttttacagatagtgccataccggagaataagctaaagggagcaataaat
aattttttgccagaagatatagttgcacgggaatgcgaagaagtttcacttgattttcat
gccagattttgcagtaagggtaagaggtatatatacacagtctttaatggaagacaaaga
cctgtcattttaagaaattatacctattattatcatagagaactcaatatagaaaatatg
aagaaagcagctaaatatctggttggaacatatgacttttctgcatttaaaaataaagga
agtaaaccaagaaactcaattagaactgtaactgaggtaggtatagttaaaaaaggagac
tttgtaatatttacggtaacaggtaatgcatttctatacaatatggtaaggataatagtt
ggaacacttttggatgttggatgtggaagatttgaggttgattatatcaagtatatactt
gactctaaagacagaagtaaagccggtaaatcggcgccggctgcagggcttttattagat
gaagttttttattga
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