Clostridium fermenticellae: D4Z93_02185
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Entry
D4Z93_02185 CDS
T06956
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cfer
Clostridium fermenticellae
Pathway
cfer03030
DNA replication
cfer03430
Mismatch repair
cfer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D4Z93_02185
03430 Mismatch repair
D4Z93_02185
03440 Homologous recombination
D4Z93_02185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfer03032
]
D4Z93_02185
03400 DNA repair and recombination proteins [BR:
cfer03400
]
D4Z93_02185
Enzymes [BR:
cfer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D4Z93_02185
DNA replication proteins [BR:
cfer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D4Z93_02185
DNA repair and recombination proteins [BR:
cfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D4Z93_02185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Secretin
Motif
Other DBs
NCBI-ProteinID:
AYD39412
UniProt:
A0A386H151
LinkDB
All DBs
Position
435691..439164
Genome browser
AA seq
1157 aa
AA seq
DB search
MEKKYEWISLHQHTEYSLLDSSAKIHNLIARAKELDMKSIAITDHGVMYGCVEFYKEAKE
QGIKPIIGCEIYVAPKSMYIKQNDRENENYHLVLLVKNEVGYDNLMKIVSKASIDGFYYK
PRVDHDYLKTHSDGIIALSACLGGEIQSYILKNRIDKAKETALFYKDIFSDGFYLELQYH
GMEEQLKVNEELIKMSKELQIPLVATNDVHYICKEDFKAHDVLLCIQTGKTVYEENRMKY
PSDEFYLKSPEEMYKIFSYVPEALENTVKIANECNFDYEFHKSKLPTFPLPEDVDPFEYL
KNLCYSGLKERYSDVTGKLKERLDYELGIINQMGYVDYFLIVWDFIRFARESGIMTGPGR
GSAAGSIVAYTLGITKIDPIKYGLIFERFLNPERVSMPDIDSDFCYERRGEMIDYVVKKY
GEDNVSQIITFGTMAARLCIRDVGRAMDYPYGEVDRIAKMVPTVLNITIDKALELSSDLK
EAYDSEQRTKELIDIARSLEGLPRHTSTHAAGVVISSKPLVSYVPLQKNEGNIVTQFTMG
TLEELGLLKMDFLGLRTLTVLRDTVNMVKSNRNISVDLDKIDYDDQKVYNMIGKGKTVGV
FQLESAGMTSFMKELKPDSFEDIIAGISLYRPGPMAEIPKYVSNKNNPGNVEYETPELES
ILSVTYGCMVYQEQVMEIVRKLAGYSMGRSDLVRRAMSKKKHHVMEEERKNFIYGIVDEN
GEVTVPGCIRNGISYDIANSIFDSMMDFASYAFNKSHAAAYAVIAFQTAYMVYYYPAEYF
AAMLNSVKGDNDKVAYYIRFANEIGIEVLPPDINESYAKFTVKEDKIRFGLSAIKNAGDN
VIDSIVRSREEKGEFKDLMDFCNKIDVSCINKRVVESLIKAGAFDCFNVYRSKMLSVYER
ILDGISSSRKKNIEGQLSLFSDISNSGVAIQYPDVKEFDKKNILSMEKEMTGLYITGHPL
DEYKKTLKLQTSVKISDIIGDKSLESDLTNHIKVEDGTKVIIGGIITSASKKITKNNEMM
AFINVEDLYGDIEVIVFPKTFSRYRNLIYEDDIILVKGRVSIREDEPSKILCESIEPLVK
LESQKLYILIDEEALMKSAIGRVKNISREFNGNTPVYICTKKERKKFRLDSEYWVDSNND
FMYDIRKEFGDQNIKLI
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaaagtatgaatggataagtttacatcagcatacggagtattcacttttggat
tcctcggctaaaattcataatctcatagcgagagcaaaagaacttgatatgaagagtata
gcaataacagaccatggagtaatgtatgggtgtgtggagttttacaaggaagcaaaagag
cagggaataaaacctataataggctgtgaaatatatgttgctccaaagtctatgtatata
aagcaaaatgatagagagaatgaaaattatcatctggttctccttgtaaagaatgaggta
ggctatgacaatctgatgaagatagtgtctaaggcgtcaattgatggattttattataaa
ccgagagtcgatcatgattatttaaaaactcatagtgatggaataatagcattaagtgct
tgtcttggcggagagatacagtcatatatactaaaaaatagaatagataaggctaaagaa
acagcccttttttataaagatatatttagtgatggtttttatctggagctccagtatcat
ggtatggaagagcagcttaaggtaaatgaagaacttataaaaatgtcaaaggaacttcaa
ataccacttgtagcaactaatgatgtacattacatatgtaaagaggattttaaggctcac
gatgtacttttatgcatacagactggaaaaacagtttatgaagagaatagaatgaaatat
ccttctgatgagttttacttaaaatctcctgaagaaatgtataaaatattttcctatgtg
ccagaagcactagaaaatacagttaaaatcgcaaatgagtgcaattttgattatgagttt
cataaatcgaaactgccaacgttcccacttccagaggatgtagatccttttgagtattta
aaaaatttatgttacagcggattaaaagagagatacagtgatgtaacgggtaaattaaag
gaaagacttgattacgaacttggtataataaatcagatgggttatgtagattattttttg
atagtgtgggattttataagatttgcacgtgagagtggtataatgacagggcctggaagg
ggatctgctgcgggatcaatagttgcgtatacacttggaataactaagatagatcctata
aaatacggacttatttttgaacgatttttaaacccggaacgtgtgtcaatgcctgatata
gattctgacttctgttatgagagacgaggcgaaatgatagactatgttgtcaaaaaatat
ggagaagacaatgtctctcaaattataacatttgggacaatggccgcaagactttgtata
agagatgttggaagggcaatggattatccatatggagaagttgatagaatagcaaagatg
gttccaactgttttaaatataactatagataaagctcttgaattaagcagtgatttaaag
gaagcttacgacagcgagcaaagaacaaaagaacttatagacatagcaagatcgcttgag
ggtcttccaaggcatacttccacacatgctgcaggtgttgttatatcgtctaaacctctt
gtaagttatgtgccgcttcaaaaaaatgaaggtaatatagttacccaatttactatggga
acacttgaggaactcgggcttttgaagatggattttttaggactcagaacgcttaccgtg
cttagagatactgttaatatggtgaaatctaataggaatatatcagtagatctggataag
atagactatgatgatcaaaaagtttacaatatgataggtaaagggaaaactgttggtgta
tttcagcttgaatctgctggaatgacatcatttatgaaggaattaaaaccagattccttt
gaggatataatagcaggaatcagtctttataggccgggtcctatggcagaaataccgaaa
tatgttagtaataaaaataatcccggtaatgttgagtatgagacacctgaacttgaatct
atactttctgtaacatatgggtgtatggtttaccaggaacaggtaatggagatagtgaga
aagcttgcaggctactctatgggaagaagtgaccttgtaagacgtgctatgtccaagaaa
aaacaccatgttatggaagaagaaagaaaaaattttatatacggtatagttgatgaaaat
ggagaagttacggtacctggatgtataagaaatggcatatcttatgatatagcaaatagt
atatttgattcaatgatggattttgcatcatatgcgtttaacaaaagtcatgcagctgca
tatgcagtcattgcatttcagacagcttacatggtgtattactatccagcagaatatttt
gccgctatgcttaacagtgtaaaaggtgacaatgataaagttgcatattatataagattt
gcaaatgaaataggaatagaggttcttccgcctgatataaatgagagctatgcaaaattc
acagtcaaagaggataagataaggtttggcctttctgcaattaaaaatgcgggagataat
gtaatagacagcatagttagatcaagagaggaaaagggagaatttaaggacttgatggat
ttttgcaataagatagatgtatcgtgtataaataagagagttgtagaaagcttgattaaa
gctggtgcatttgactgttttaatgtgtatcgttcaaagatgctttctgtttatgagaga
atattggatgggataagtagttctagaaaaaaaaatatagaaggccaattgagtcttttt
tctgatataagtaattccggggttgcaattcaatatccagatgtaaaggagtttgataag
aaaaacattttatcgatggaaaaggaaatgacaggactttatataactggtcatccactt
gatgaatataaaaagacacttaaattacaaacaagtgtaaaaatatcagatataatcgga
gataaatctttagagagtgatttgacaaatcacatcaaggtagaagatggtacgaaggtt
attataggtggaataataacttccgcaagtaagaagataactaagaataatgaaatgatg
gcatttataaatgttgaagatttgtacggtgatatagaagtaattgtttttccaaaaaca
tttagtagatatagaaaccttatatatgaagatgatattattcttgtaaaaggaagagtt
agtataagggaagatgaaccctctaagattttatgtgagagtatagagcctttagtcaaa
ttagaaagtcaaaagttatatatactaatagacgaagaagctttaatgaagtcagcaatt
ggcagggtgaaaaatatttcgcgtgagtttaatggaaatactccagtatatatatgcact
aagaaggaaagaaaaaaatttagattggatagtgaatactgggtagattccaataatgac
tttatgtatgatataagaaaagaatttggtgatcaaaatataaaattaatttag
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