Clostridium fermenticellae: D4Z93_02705
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Entry
D4Z93_02705 CDS
T06956
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfer03009
]
D4Z93_02705
Enzymes [BR:
cfer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
D4Z93_02705
Ribosome biogenesis [BR:
cfer03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
D4Z93_02705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF2100
iHKD
Motif
Other DBs
NCBI-ProteinID:
AYD39507
UniProt:
A0A386H1C0
LinkDB
All DBs
Position
554413..555129
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AA seq
238 aa
AA seq
DB search
MERLDKILSNLGYGTRKEIKAIVKQGMVEVDNLVIKDSATKIDPNINRIKIAGETVIYRK
YIYIMMNKPDGVVSATFDKHDQTVIDLLEPEHQAFNPFPVGRLDKDTVGLLLITNDGSLN
HKLISPKKHIDKVYYAEINKKVTKEDVEAFEKGITLDDGYKCLPGILEILNADEECSKVK
VTIHEGKFHQVKRMFESLGKSVVYLKRIEFGGLILDSDLDEGQYRELTHNETKSLKYS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattggataagatattgtcaaacctcggatatggaactagaaaagaaattaaa
gctattgtaaagcagggaatggttgaagtggataatttagttattaaggatagtgcaaca
aaaatagatccgaatattaatcgtataaaaattgctggggaaactgtaatatatagaaaa
tatatttatattatgatgaataagccagatggagttgtgtctgcaacgtttgataaacat
gatcaaacggttatagatttattggaacctgaacatcaagcgtttaacccatttccggtt
ggaagactcgataaggatacggttggacttcttttaataaccaatgacggaagtttaaac
cataaactaatttctcctaaaaaacatattgataaagtctattatgccgaaattaataaa
aaagttacaaaagaagacgtagaagcatttgaaaagggtattaccttggatgatgggtat
aaatgtcttcccggaatccttgagattttaaatgcagatgaggaatgttctaaagttaag
gttacaatacatgagggtaaatttcatcaagtaaaaaggatgtttgagagtcttggaaag
agtgttgtttatttaaagagaatagaattcggaggacttattttagattcggatcttgat
gaaggacaatacagggaattaacccataatgagacaaaaagtcttaaatatagttaa
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