Clostridium fermenticellae: D4Z93_02715
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Entry
D4Z93_02715 CDS
T06956
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfer
Clostridium fermenticellae
Pathway
cfer03420
Nucleotide excision repair
cfer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D4Z93_02715 (pcrA)
03430 Mismatch repair
D4Z93_02715 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfer03400
]
D4Z93_02715 (pcrA)
Enzymes [BR:
cfer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D4Z93_02715 (pcrA)
DNA repair and recombination proteins [BR:
cfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D4Z93_02715 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D4Z93_02715 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
TRIM_CC
Motif
Other DBs
NCBI-ProteinID:
AYD39509
UniProt:
A0A386H1F4
LinkDB
All DBs
Position
555828..558077
Genome browser
AA seq
749 aa
AA seq
DB search
MDLKEFLNNEQYEAAMTVEGPLLILAGAGSGKTRVLTYRIAHMIENLHIYPSKILAITFT
NKAANEMKERVRKLVGNKVDNMWISTFHSSCVRILRREIDRLGYNKNFAIYDSYDQKALI
KQCMQEVDINDKNITDKEIINRISDQKDNLISPEEYKKKNENNFRISKIADVYLLYQKKL
KNNNALDFDDLIYKTVELFKKNPDVLEFYQRKFQYIMVDEYQDTNRCQYEFLRLLAAEHN
NICAVGDDDQCIYQWRGADIRNILDFEKDYPNTKIVKLEENYRSKANILNAANDVIKNNV
NRKIKKLRTENGSGEKIKIYRAQSDIDEAVYVSSKIKKMVESKRKYKDFAILYRTNAQSR
IFEEVFIKEGIPYRIIGGLKFYDRKEIKDIMAYLKFINNPLDDVSLRRIINVPKRNIGKT
TVKKVQDFANSMDECMYSVLLDVDEVLNLSSRSISSIKKFVSIINSFIKSKDKLPVSNLM
EEILEATNYIDKISETKDPEMLSRIENLNQLMISAKEFESSSEDKSLSAFLENVALVSDI
DNFDEDSDSVVMMTIHSAKGLEFPVVFMVGMENGIFPSSMSLDDENQMEESRRLCYVGIT
RAKELLYMTSAERRRTFKNTVFNPESDFIYEISDSLKDLEEVQMKPRWSSNGFKRKESSG
NKAIDEKPHFIQNGIEPRNVKIEVKTSSKNDIGLRANEIKMGMKVKHAKFGVGTIVSISN
SGGNVKLTIAFDKMGIKNLMYGVVPLEAV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaagaatttttaaataatgaacagtatgaagcggcaatgactgtggagggt
ccactgcttattctggctggagctggctcggggaagacaagagtattaacttatagaata
gctcatatgatagaaaatttgcatatatatccatctaaaattctagctataacttttaca
aataaagcagctaatgaaatgaaggagagagtcagaaaattagttggaaataaagtagat
aatatgtggatttcaacatttcattcgtcttgtgtgcgaatcttaagaagagaaatagat
agacttggatacaataaaaattttgcaatatatgattcatatgatcagaaggctttaata
aaacagtgtatgcaggaagtggatataaatgataaaaatataactgataaggaaataata
aatagaatatcagatcaaaaagacaacttgatatctcctgaagagtataagaagaaaaac
gaaaacaattttagaataagcaaaattgcagatgtgtatttgctataccaaaaaaaatta
aaaaataataatgcacttgactttgatgatttgatatataagacagttgaacttttcaag
aaaaatccggacgtgcttgagttctatcaaagaaaatttcaatacataatggtagacgag
tatcaggatactaatagatgtcaatatgaatttcttagattattggccgccgagcataac
aatatatgtgcagttggcgatgatgatcagtgtatttaccagtggagaggtgctgatata
agaaatatacttgattttgagaaggactaccctaatacaaaaattgtaaaacttgaggaa
aattataggtcaaaggcaaatatattaaatgcagcaaatgatgttataaagaataatgtt
aatagaaaaataaagaagcttagaactgaaaatggaagcggggaaaaaataaagatatac
agggcacagtcagatatagatgaggcagtatatgtaagttctaaaataaaaaaaatggtt
gagagcaaaagaaagtataaggattttgcaatactttataggacgaatgctcaatcacgt
atttttgaagaggtatttataaaggaaggaattccatatagaataataggcggacttaaa
ttttatgatagaaaagaaataaaagatataatggcatacttaaagtttataaacaatcca
ctagatgatgtaagtcttagaagaattataaatgttcctaagcgtaatataggtaaaact
actgtaaaaaaagtccaggattttgcaaattctatggatgaatgtatgtatagtgttttg
cttgatgtagatgaagtgctgaatctttcttcaagaagtatatcttcaataaaaaaattt
gtaagtatcataaatagctttataaagagcaaggataaacttcctgtttcaaatttgatg
gaagagatacttgaagctacaaattatattgataaaataagcgaaacaaaagaccctgaa
atgctaagcagaatagaaaacttgaatcagcttatgatttctgcaaaagagtttgaaagc
agctcagaagataaatcattgtctgctttccttgaaaatgttgcattagtatctgatata
gataattttgatgaggattctgattctgtagttatgatgacaatacacagtgcaaagggt
ctggagtttccggtagtatttatggttggaatggagaatggaatatttccaagcagtatg
tctttggatgatgaaaatcaaatggaggaatcaagaagattatgttatgttggtataact
agagctaaggaattgctatatatgacatcggcagagagaagaagaacttttaaaaataca
gtatttaatcctgaatcggactttatatatgaaatatctgatagtttaaaagatcttgaa
gaagttcagatgaagccaagatggagttccaatggatttaagagaaaagagtcatcaggt
aataaagctatagacgaaaaacctcacttcatacaaaatggtattgaaccgagaaatgtg
aagatagaagttaaaacatcatctaaaaatgatataggattaagggcaaatgaaataaag
atgggtatgaaagttaaacatgcaaagttcggagttggaactattgtaagtatttcaaat
agtggaggaaatgttaaactcaccatagcatttgataagatgggcattaagaatttgatg
tatggtgtagttccattggaagcagtatag
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