Clostridium fermenticellae: D4Z93_04150
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Entry
D4Z93_04150 CDS
T06956
Name
(GenBank) type IA DNA topoisomerase
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfer03032
]
D4Z93_04150
Enzymes [BR:
cfer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D4Z93_04150
DNA replication proteins [BR:
cfer03032
]
Prokaryotic type
DNA Topoisomerases
D4Z93_04150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_PADR1
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
AYD39755
UniProt:
A0A386H2I8
LinkDB
All DBs
Position
838345..840777
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AA seq
810 aa
AA seq
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MKRLIIAEKPSLAMNIVKSIGSMNRYDGYFEDSNYIVTFAFGHLLQLFDVDDYFNREKSR
WELEELPFIPDNFKFKIRNDSGVKKQFKIINDLINRKDVLEIVNCGDADREGQVIIDNIV
NRIFKDSELKKTVKRMWLPEQTMQTIKDELKTLKDDGEYSNLYNEGLARTYLDWTYGINL
TRYLSIKSKSFLPVGRVLIPIVKFIYDRDKTIKNFKPETFFEIGAIISKENLKIKAKLKD
RHFSVSERKKAEKLLKGLEDKKAIVSKVEKKEVKKYPPKLFSLDTLQNKMFKDYKMSLDD
TLKYLQSLYENGYTTYPRTNTEYLADNEKSKIKSVIAQVREKYNVDIAFKDKKTIFNNKK
VESHSAITLTVKFPCEKHLTEGERKVYDAIKNRFISNFLNEEALVEETKIIINIENEIIE
LKGNVIKQKGFLKYERMKRENELPKFVEGEELDTKLSVDEKQTQKPNKVTESELNNFLKN
PFKKQEVEELESENDDDEYKFILEGCEIGTVATRAGIIKNAQKYEYIKEIKGHLECEDKG
TKLIEVLEKLNIDMNKEKTVEFGRELKKVYKSDIDVGTVVDNVKRELNSIITNGKNIKIS
RIENKVYRTENESNSLGACPACGKGSIITGRTGYGCSRWRQNCNFFIGKKIAGKDISESV
VKKLLRDKKTGIIKGFKSKNGKNFNAGLKIEKSNVVFDFTLQDEGLGICPVCGKGKVKEN
KSGYGCSRWKEGCKFFVGNKIAGKKISEAMVKKLIKDKKTKIMKGFRSKSGKDFEAALKV
ENGKVVFDFTPAKLISKNTHKVAGSKVNLP
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtttaataatagcagagaagccgagcttggccatgaatatagttaaaagcatt
gggagcatgaatagatatgatggatattttgaagacagtaattacattgtaacctttgca
tttgggcatcttcttcagttgtttgatgtagatgattattttaatagagaaaaatcaaga
tgggagcttgaggagcttccttttattccagataattttaaatttaagataagaaacgac
agtggggtaaaaaaacaatttaaaataataaatgatttaattaatagaaaagatgtttta
gagattgtaaattgtggagatgcagatagagaaggtcaagttattatagataatatagta
aatagaatttttaaggatagtgaattaaaaaaaactgtaaaaagaatgtggcttccagaa
caaactatgcaaacaataaaagatgaattaaaaactttaaaagatgatggggagtatagt
aatttatataatgaagggcttgcaagaacatatcttgattggacatatgggataaattta
acaaggtatttaagcataaaatctaaatcatttttacctgtaggtcgtgtgcttatacca
atagttaaatttatatatgatagagataaaacaataaaaaactttaaaccagaaaccttt
tttgaaataggtgcgatcataagcaaagaaaacctaaaaataaaagctaagttaaaagac
cgacatttttcagtgagtgaaagaaaaaaagcagaaaagctattaaaaggtttggaggat
aaaaaagcaatagtaagtaaggtagaaaagaaagaagtaaaaaagtatccacctaaatta
ttttcacttgatactctgcagaacaagatgtttaaagattataaaatgtcccttgatgat
acattaaaatacttgcagagcctgtatgaaaatggatatactacatatccaaggactaat
acagaatatttggctgataatgagaaaagtaaaataaaaagtgttattgcacaagtaagg
gaaaagtataatgtagatatagcttttaaagataaaaaaactatatttaacaataaaaag
gttgaaagccatagtgcgattacacttactgtaaaatttccttgtgaaaagcatttaact
gaaggtgaaagaaaggtttatgatgcgataaagaatagatttataagtaattttttaaat
gaagaggcattggtagaagaaactaagataatcataaatatagaaaatgaaattatagaa
cttaagggaaatgttattaagcaaaagggatttttaaaatatgaaagaatgaaaagggaa
aatgaacttcctaaatttgttgaaggtgaagaacttgatacaaagctttcagtagatgaa
aaacaaactcaaaaaccaaataaggtaacagaatcagaactgaacaattttctcaaaaat
ccttttaaaaaacaagaagtagaagaacttgaatcagaaaatgatgatgatgaatataaa
tttatacttgaaggctgtgaaataggcactgtggcaacaagggcaggaattataaaaaat
gcacaaaaatatgaatatataaaagaaatcaaaggacatttagaatgtgaggataaggga
actaaacttatagaagttcttgaaaagcttaatattgatatgaacaaagaaaaaaccgtt
gagtttggaagggaacttaaaaaggtatataaaagtgatatagacgtaggtaccgtagtg
gataatgtaaaacgtgaattaaatagtataataactaatggtaaaaatataaaaattagt
agaatagaaaataaggtatataggacagagaatgaatctaatagtttaggggcatgtcct
gcatgtggaaagggaagtattataactggcagaacaggttatggctgcagcagatggaga
caaaactgtaacttttttataggaaaaaagatagctggaaaggatataagtgagtcagtt
gtaaaaaaacttttaagggataaaaaaacgggaattataaaagggtttaagagcaaaaat
ggcaagaattttaatgccgggctcaagatagagaaatctaatgttgtgtttgattttact
cttcaggatgagggattaggcatatgtccggtatgtggtaaaggtaaagtaaaagagaat
aaatcaggctatggctgcagcagatggaaggaaggatgcaagttttttgtaggaaacaaa
atagccgggaaaaagataagtgaagctatggttaaaaaacttataaaggataaaaaaaca
aaaattatgaagggtttcaggagcaagtctggtaaagactttgaagctgcattaaaggtg
gaaaatggcaaagttgtatttgattttacgccagcaaaacttatctctaaaaatacgcat
aaagttgccggctcaaaagttaatttaccatag
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