KEGG   Clostridium fermenticellae: D4Z93_04770
Entry
D4Z93_04770       CDS       T06956                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cfer  Clostridium fermenticellae
Pathway
cfer03030  DNA replication
cfer03410  Base excision repair
cfer03420  Nucleotide excision repair
cfer03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cfer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D4Z93_04770 (polA)
   03410 Base excision repair
    D4Z93_04770 (polA)
   03420 Nucleotide excision repair
    D4Z93_04770 (polA)
   03440 Homologous recombination
    D4Z93_04770 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfer03032]
    D4Z93_04770 (polA)
   03400 DNA repair and recombination proteins [BR:cfer03400]
    D4Z93_04770 (polA)
Enzymes [BR:cfer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D4Z93_04770 (polA)
DNA replication proteins [BR:cfer03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     D4Z93_04770 (polA)
DNA repair and recombination proteins [BR:cfer03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     D4Z93_04770 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D4Z93_04770 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_2 HHH_5
Other DBs
NCBI-ProteinID: AYD39866
UniProt: A0A386H2H7
LinkDB
Position
987693..990317
AA seq 874 aa
MSKQRLLVLDGNSIMNRTFYALPPLTNSEGIHTNAVYGFITMLLKMKEEIKPDYIVCAFD
KKAPTFRHNEYKDYKAGRKKMPPELAEQFPIIKDIFNLLSINIFEIDGFEADDIIGTIST
FADNNGIEVYIVTGDRDALQLARNDVKVVITKKGVSEKEIYDKNRMIDEFGVTPTQYIDV
KGLMGDKSDNIPGVPGIGEKTAFKLIKEYKSIENVLTNIDNIKGNKLKENLRQYSEQAIF
SKKLATIVTDVPIEINLSDIKSDDRYDEGALKKLFIKLQFRSLLEKIIPTEKITESELKF
KLVSDLQKLESSAQKILDAAKKDENLYITFKIMDENIYSKSCIDKIFINIGDLSYIMNVK
DIYDASANSTVMILRTIFEDVNIKKISYDVKLPIIVLKKMGIDFNGIDFDTKIAAYLVDS
SRGKYDFETVIEDYLAISVDGEDDKADLKRTILLKELYRVLKDNIDQKNMHELLYDMEQP
LINVLASMEAQGFMVDRDKLVELEDKFKIEIDESKKEIYSMADEEFNINSPKQLGKILFE
KLDLPVIKKTKTGYSTNADVLEKLYDKHPIIEKIIYYRQLTKLYSTYIEGLKAVIDTDNK
IHSSFNQTVTTTGRLSSTEPNLQNIPVKYEMGKEIRKIFIPEDDSVILSADYSQIELRVL
AHIANDNNLIDAFLHHSDIHTKTASEVFNVPIDEVTHTQRSNAKAVNFGIVYGIGDFSLA
KDLKISRKEARDYIDKYFERYPGVKEYLDNIIEKAQKQSYVTTILNRRRSIQEINSSNKM
VREFGKRLAMNTPIQGSAADIIKIAMVNVYDKLNEQGLKSRLILQVHDELILNVYRNEIG
IVKNLVKNEMENAIKLSVPLEVDINIGDSWYDTK
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgtcaaaacaaagattactagtacttgacggtaatagtattatgaacagaacattttat
gcacttccaccactaactaattctgaaggaatacatactaatgccgtatatggatttatt
acgatgctgcttaaaatgaaagaagagataaagcctgattatatagtatgtgcttttgat
aaaaaagcaccaacattcagacataatgaatataaagattataaggctggtagaaaaaag
atgcctcctgaattagcagagcaatttcctataattaaagatatattcaatttgctttct
ataaatatatttgaaatagatggttttgaagcagatgatataataggaactatttctaca
tttgcagataataatggtatagaggtatacatagttacaggtgatagagatgcgcttcaa
cttgcaaggaatgatgtcaaagttgtgataactaaaaaaggagttagcgaaaaagaaata
tacgataaaaacagaatgatagatgaatttggagtgacacctactcaatatatagatgtt
aaagggctaatgggtgataagtcggataatatacctggagttccaggaataggtgaaaag
acagcatttaaattgataaaagaatataaaagtatagaaaatgtacttactaatattgat
aacataaagggaaacaagttaaaagagaacctaagacagtatagtgaacaggcaatattc
agtaaaaaacttgctaccattgtaacagatgttcctatagagattaatctttctgatata
aaatcagatgatagatatgatgaaggtgctcttaaaaaactatttataaaacttcaattt
agatctttacttgaaaagataataccaactgaaaagataacagagagtgaattaaagttt
aaattagtaagcgatttacaaaaattggagagttctgcacaaaaaatattggatgcagct
aaaaaagatgagaatttatacattacatttaaaattatggatgaaaatatatattctaaa
agctgtatagataaaatatttataaatataggtgacttaagctatattatgaatgttaag
gatatttatgatgcctccgctaactcaacagttatgatattgagaactatctttgaggac
gttaatattaagaagattagttatgatgtcaaacttcctattatagttttgaaaaagatg
ggtatagattttaatggtatagactttgatactaaaatagctgcttatttagtggattcc
tcaaggggaaaatatgattttgaaactgtgatagaagattatttggctatctctgtagat
ggagaagatgataaggctgatttaaaaagaacaattctgcttaaagagctttatagagta
cttaaagataatatagatcaaaagaatatgcatgaactgctgtatgatatggaacagcct
cttataaatgtacttgcatcgatggaggctcagggatttatggttgatagagataagctt
gtagaacttgaagataagtttaaaattgaaattgatgagtctaaaaaagagatttattct
atggcagatgaggagtttaatataaattctccaaagcaattaggaaaaatcttatttgaa
aaactcgatttgccggttataaagaaaactaaaactggatattcaacaaatgcagatgta
ttggaaaaactttatgataagcatcctataatagaaaaaataatatattatagacaactt
acaaaactatattctacatatatagagggacttaaggctgtaattgatacagataataag
attcattcaagttttaatcaaacggtaacaacaacaggcaggctctcgagtacagaacca
aatttgcagaatataccggtaaaatatgagatgggtaaggagataagaaaaatatttatc
cctgaagatgactcggttatattgtcagctgactattcacaaatagaactgagggttctt
gcacatatagcgaatgataataatctaatagatgcatttttacatcatagtgatattcac
acaaaaacagcatctgaagtgtttaatgttcctatagatgaagtaacgcatactcagaga
agtaatgctaaagccgtaaattttggtatagtttatggtataggagatttcagtcttgcc
aaagatctgaaaataagtagaaaagaggccagggattatattgataaatattttgagaga
taccctggtgtaaaagaatatctagacaatattatagaaaaggctcaaaaacagtcatat
gtaactacaattttaaataggagaagaagcatacaagaaattaattcatcaaataaaatg
gtgagagaatttggtaagagattggcaatgaacacacctatacagggaagtgcggctgat
ataataaaaatagcaatggtaaatgtgtatgacaagttgaatgaacagggacttaaaagt
aggttgattcttcaagttcatgatgaattgatattgaatgtgtacaggaatgaaattggg
attgttaaaaacttagttaagaacgaaatggagaatgctataaaattaagtgtgccttta
gaggtggatataaatataggagatagttggtatgatacaaagtaa

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