Clostridium fermenticellae: D4Z93_04870
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Entry
D4Z93_04870 CDS
T06956
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cfer
Clostridium fermenticellae
Pathway
cfer00550
Peptidoglycan biosynthesis
cfer01100
Metabolic pathways
cfer01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D4Z93_04870
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D4Z93_04870
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfer01011
]
D4Z93_04870
Enzymes [BR:
cfer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D4Z93_04870
Peptidoglycan biosynthesis and degradation proteins [BR:
cfer01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
D4Z93_04870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AYD39884
UniProt:
A0A386H2K4
LinkDB
All DBs
Position
1005517..1008189
Genome browser
AA seq
890 aa
AA seq
DB search
MKIDKKNGINRYAALITIMVLIFVSILSRIIFLQVVKGEDYKAKADSNSIREIPETAPRG
KILDTNNKVLATNTQSYVLVYNQTDEIDQTFFQTMDKVFKILDENGETQKDDFELKINPY
RFEFRSDDPKTQKNLELRFKKDRGMDSYVQKKLFGDKSTDKLTTEDKAKIDEELLKITPE
ETFKFLVKKYNINSSKYSLEKQRRFMIIKDTAKMNSFSGYKPVTVASNIKRSTALIFLQM
LNELPGIDVDTQPIRTYPYGEVGSAFLGYISKITSDDEKYSEKGYDTSTDYIGAAGLEAS
YEDRLKGSKGGKIVKLNKQGRIIQELGSRDSYPGQSLKLTINEEVQAAAEKALDTKMSEL
RANPSAQQRSNTANATRGAAVVLDVNTGGVLALASRPGYDPNLFSTPGSLSTDLYNQFFN
PDLKAFGKNYIEQRGLMAYYPGETEDEVLNTLFPVDKSIKNNTTVRKDPYDIYAKPLFDY
ATQSLIPPGSTFKPMTAIAGLQGGVITPGFVVDDEGIFDKGGGNYTRFTLDGANGPVDLI
SAIQKSSNPYFMTVGGLIKKALGSDGLAKYAWKFGLGVPPTSDEKPSTGIEIPEAFGQVY
NMWSMKNLYASTYLYKTMQTLKSGGDNGYKFTPIDLYDNDNDSSKVKDIKKKLKESIQGS
IKDGSKSFNKDTYNELITNLVKEDPQYKDKGISDKDIKSMISCIYYTTVSDANSQINVTA
PMYDAAIGQGMNQFTPLQIANYIATIANGGTRYKIHLVDEILDPNGKVIEQNKPEVIEKT
GISAENLAAVKSGMAAVNEKGTAAGAFQSFSIQTAGKTGTASTNNQEAVGRTDYSVYVGF
APLDDPKIAVCIVMFDGGQGAQSAYVARDIYSAYFHLNDGSDSGTSSTGQ
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgataaaaagaatggtatcaatagatatgcagcgctaataactataatggtt
ttaatctttgtttctattttatccaggataatttttcttcaggtagtaaagggagaggat
tataaagcaaaggcagatagcaattctataagagaaattcctgaaactgcacctagagga
aagattcttgatactaataacaaggtgcttgcaactaatacacaaagttatgttctggta
tataatcaaactgatgagatagatcaaacattttttcagactatggacaaggtgtttaag
attctggatgaaaatggagaaactcagaaagatgattttgaattaaagataaatccatat
agatttgaatttagaagtgacgatccaaaaactcaaaaaaatcttgaattgagatttaaa
aaggatagaggtatggattcatatgtgcagaaaaaattattcggagataagagtacagat
aaacttactactgaagataaggcaaaaatcgacgaagagttgcttaaaataacccctgag
gaaacatttaaatttctggtgaaaaaatataatataaatagttctaagtattcccttgag
aaacagagaaggtttatgataataaaagatactgctaaaatgaacagtttttcaggatat
aaaccggtaactgttgccagcaatataaagagaagtaccgctttgatttttttacagatg
ttaaatgagcttcctggaattgatgtcgatacacagccaattagaacgtatccgtatggt
gaagttggatctgcatttttaggttatatatctaagataacatctgacgatgaaaaatac
agtgaaaaaggatatgacacaagtacggattatataggtgccgcaggtcttgaagcttca
tatgaggatagactaaaaggttctaaaggtggtaaaattgttaaactcaataagcaggga
agaataattcaggaacttggcagcagagattcttatcccggtcagagtttaaaactcact
ataaacgaggaagttcaagcagctgcagaaaaggcacttgatacaaaaatgtcagaatta
agagctaacccttctgcacagcagcgttccaatacagctaatgcaacaagaggagccgca
gttgttttagatgtgaatacaggtggtgttttggcacttgcaagcaggccggggtatgat
ccaaatttgttttctactcccggaagtctaagtacagatttatataaccaattttttaat
cctgatcttaaagcatttggtaagaattatatagaacaaaggggattaatggcatattat
cctggtgaaacagaagatgaagttttgaatacattgtttcctgtggataaaagtataaaa
aataatactaccgtaaggaaggatccttatgatatatatgcgaaaccactttttgattat
gcgactcagtcacttatacctccaggatctacatttaaacctatgactgccattgcagga
cttcagggtggtgttataacacctggttttgtggtggatgatgaaggaatatttgataaa
ggtggaggaaattatacacgctttactttggatggagcaaatggaccagttgaccttata
agtgccattcaaaaatcgagtaatccatactttatgacagtaggtggacttataaaaaaa
gcattaggcagcgatggacttgctaaatatgcatggaaatttggacttggtgtcccacct
acttctgatgaaaaaccatcaactggcatagaaatacctgaagcatttggccaggtgtat
aatatgtggtctatgaaaaatttgtatgctagtacgtatttatataagacaatgcaaacg
ctaaagtctggtggtgacaatggatataaatttacccctattgatctgtatgataatgat
aatgattctagtaaggtaaaggatataaagaaaaagcttaaagaatcaatacagggttca
ataaaagatggaagtaaatcatttaataaggatacgtataatgagttaataactaattta
gtgaaagaagatcctcaatataaagataaaggtatatcagataaagacataaaatcaatg
atatcgtgtatatattatacaacggtttctgatgcaaatagccagataaatgttacagct
ccaatgtatgatgctgctataggtcagggtatgaatcaatttacccctctccaaattgct
aattatattgcgactattgcaaatggtggcactagatataaaattcatcttgtagatgaa
attttggatccaaatggaaaggttattgaacaaaacaaaccagaggttatagagaaaact
ggaatcagtgctgagaacctggcggcagttaaatcaggaatggctgctgttaatgaaaaa
ggtactgcagcaggtgcatttcaaagtttttctatacagacagcaggaaaaactggtaca
gccagtactaataatcaagaggctgttggcaggactgactattcagtatatgttggattt
gcaccacttgatgatcctaagatagctgtatgtattgtaatgtttgatggtggtcaggga
gcccaaagtgcatatgtggctagagatatatattccgcatattttcatctgaatgatggt
tcagattctggaactagcagtaccggccaataa
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