Clostridium fermenticellae: D4Z93_05730
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Entry
D4Z93_05730 CDS
T06956
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfer03036
]
D4Z93_05730 (smc)
Chromosome and associated proteins [BR:
cfer03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
D4Z93_05730 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
Fez1
ATG16
PUMA_CC
DUF4795
DUF1664
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AYD40041
UniProt:
A0A386H2V3
LinkDB
All DBs
Position
1186838..1190404
Genome browser
AA seq
1188 aa
AA seq
DB search
MFLKYIEIRGFKSFADKTEITLKKGVTGIVGPNGSGKSNIADAVRWVLGEQSIKNLRGGK
MEDVIFSGTQFRRAVGLSQVSLTLDNEDKKLPIGYTDVTIARRLYRSGESEYYINNTRCR
LKDIQQLFMDTGIGKEGYSIIGQGKIDAILSGKPEDRRGLLEEAAGIVKFRWRKDEAQKK
LENTDANLIRIDDILRTYNERLEPLRLENEKAKKFIVISKELKDKEVNIVIHSIEEIQIK
IDDLDKKSDKISSDIDKLNLDYKNVNDYIVKNNALIEELNLKDEDYKKQYYDNKSRKQNI
EANINLLNERLKNAKISIETHSSEFKDIELKVKGLIENKNDIDKILRNLIEKQNFLKENT
DVFQKRIDNLSASIYDKSDLVKNLKNDQIEYVTTVSNVKNDLTMMNNNIKELKEKISNME
KQCRGYSNSMDMNLNTKSILQKTFSDMKSEISGIDDKIHQNKKSIVQLNKSVLSCENELR
EVNTKKAKLEANYIMLNNLEKQHEGYSKSVKILMNDINKGKVNVGKDGCFVLGDVFKVRK
KFEIAIEIALGFTISQIITLNDNIARKLIKYLKDNNIGRATFLPLNTVRGKKFTDMKHIS
SMNGYIGIASDLIEYDTVFTNAIVHILGRTIVVDNMNNALKIAKQGNYSFKIVTLDGQVV
NPGGSLTGGSLQHKSISIIGRKRQIHETKFEIDKYTEKVETLDNSIRIHRYEIKKLDDQN
LNFKDEIYNKNLEVAKIDQKIRTIEDEYKKLNENIKVCTTEIASLNLKLEETINNIKLKE
TELQVISNKQMENNKLIIETENKLEDRNKEINENRDKLTGFKVEKAQIDESVLNKRSELQ
NIKFSIDEMTTKKVNLKDEIKKLEDELVDYKNNINNSRSEILKIDEYLSELDHKSRDISV
DLIRIKQELEKHNQGIHDISMDKSKLEKELHKIEILITRFNTEKDGFYTKLNQELEITFE
EALKLKKSIPNLESYKRDIFNLKKEISELGVVNLGSIEEYKTLVEKVNFMTSQREDLVSS
KSELISLINEMTDKMRDLFAKNFEELRKNFNEIFNQLFKGGSADLILSDGDELTGNIEIK
AQPAGKKLQNINLMSGGEKGLSAIALLFAILKMKPTPFCILDEIEAALDDANVVRYADFL
KRFSNGIQFIVITHRKGTMEAADVLYGVTMEEKGISKIVSVDLKEKVS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaagtatattgaaatacgtggttttaaatcttttgcagataaaaccgaaata
accctaaagaagggtgttacaggtattgtcggtccaaatggaagtggaaaaagtaatatt
gcagatgctgtaaggtgggtacttggtgagcagagcataaaaaacctccgaggtggtaaa
atggaagatgtaattttttccggaactcaatttaggagggctgtgggattaagccaggta
tcccttactctcgataatgaagataaaaagctgccaattggttataccgatgtgactata
gctaggagattatatcgttcaggggaaagtgaatactacataaataatacccggtgcaga
cttaaagatattcagcagctttttatggataccggtataggtaaagaaggttattctata
ataggacaaggcaaaatagatgcaattttaagtggtaaacctgaagatagaagaggtctt
ttagaggaagcagctggaatagtcaaatttagatggagaaaagatgaagctcagaagaaa
ttagaaaatacagatgcaaatttaataagaatagatgatattttaagaacatataatgaa
agattggaaccattgaggctggagaatgaaaaggctaaaaaatttatagttatatcaaaa
gaacttaaggataaggaagtaaatatagtaattcattccattgaagaaatacaaattaaa
attgatgaccttgataaaaaatcagataagataagttctgatatagataaactgaatttg
gattataagaatgttaatgactatatagttaagaataatgcattaatagaagaattgaat
cttaaagatgaggactataaaaagcagtactatgataataaatcaaggaaacaaaatata
gaggcaaatataaacctgcttaatgaaagattaaagaatgcaaaaatttctatagaaact
cattcaagcgaatttaaggatattgaattaaaagttaagggtttaattgaaaataagaat
gatattgataaaattttgagaaatttaattgaaaaacaaaattttcttaaagaaaatacg
gatgtttttcaaaagcggatagataatttaagtgcatccatatatgataaaagcgatcta
gttaaaaatttgaagaatgaccagatagagtacgttacaactgtatcaaatgtaaaaaat
gatttgactatgatgaataataatattaaggaattaaaagaaaagataagcaatatggaa
aagcagtgcagggggtattcaaattctatggacatgaatttgaatacaaaaagcatatta
caaaaaaccttttctgatatgaaaagtgaaatatcaggtattgatgataaaattcatcag
aataaaaagagtatagttcaacttaataagtcagttttatcttgtgaaaatgaactgaga
gaagttaatactaaaaaggcaaagttagaagctaattatattatgctgaataatcttgaa
aaacaacatgagggttattcaaaatctgttaagatacttatgaatgatataaataaggga
aaagtaaatgtgggtaaagacggatgttttgtattgggtgatgtttttaaggttagaaaa
aaatttgaaattgcgatagaaatagctttaggttttactatatcacagattataacactt
aatgataacattgcgcgaaaacttataaagtatttaaaagacaataatatagggagagca
actttcctgcctttaaatacagtcagaggtaaaaaatttactgatatgaagcatataagc
agcatgaatgggtatataggaatagcaagtgatcttatagaatatgatactgtgtttact
aatgctattgtacatattcttggtaggacaattgtagtagataatatgaataatgcactt
aagatagcaaaacagggcaattactccttcaagattgttacacttgacggtcaagttgtt
aatccaggtggttcgcttacaggtggaagccttcagcataaaagtattagtataatagga
agaaaaaggcaaatacatgaaacgaaatttgaaatagacaagtatactgaaaaagttgaa
actctggataatagtataagaattcatagatatgaaattaagaagctagatgatcaaaat
cttaattttaaggatgaaatttacaataagaatttggaagtggcgaagatagatcaaaaa
ataaggacaattgaggatgaatacaaaaaacttaatgaaaatataaaagtttgtacaact
gaaatagcttctttaaatttaaaattagaagaaacaattaataacataaaattaaaagaa
actgaattgcaggttatatcgaataaacaaatggaaaataataaacttataattgaaact
gaaaataaacttgaagatagaaataaggaaataaatgagaatagggataagcttactggt
tttaaagtagaaaaagctcaaatagatgaaagtgttttaaataaaagatctgaactccaa
aatataaagtttagtatagatgagatgaccacaaaaaaagttaatttaaaagatgaaata
aagaaacttgaagacgagttagtagattataaaaacaatataaataatagtagaagtgaa
attttaaaaatagatgagtatctatcagaacttgatcataagagcagagatataagtgtt
gacttaatacgtataaaacaggagcttgaaaaacataatcaaggtatacatgatatttct
atggataaatcaaagctagagaaggaattacataaaatagagatacttataacaaggttt
aataccgaaaaagatggattttatactaaattaaatcaggaattggaaattacttttgaa
gaggcattaaaattaaaaaaaagtataccaaatctcgaatcatataaaagagatatattc
aacttaaaaaaggaaatttcagaacttggtgttgtgaatcttggatcaatagaagagtat
aaaactttagttgaaaaagttaattttatgacttctcaaagagaagatcttgtaagttcc
aaaagtgaacttataagccttataaatgagatgacagataagatgagagatttatttgca
aagaattttgaagagcttagaaagaattttaatgagatatttaatcagctttttaagggt
ggaagtgcagacttgattttatcagatggagatgaacttacgggaaatatagagatcaaa
gcacagcctgcaggtaaaaagcttcaaaatattaatcttatgtcaggcggagaaaagggt
ttgtctgctatagctcttttgtttgctatattaaagatgaagccaacgccgttttgcata
ttagatgaaatagaagctgcacttgatgatgcaaatgtagtgagatatgctgatttctta
aagagattttcgaatggcatacagttcatagttataacacatagaaagggaactatggaa
gctgcggatgtgttgtatggtgttactatggaggaaaaaggtatatctaaaatagtatct
gtggatttgaaggaaaaagtctcataa
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