KEGG   Clostridium fermenticellae: D4Z93_05745
Entry
D4Z93_05745       CDS       T06956                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cfer  Clostridium fermenticellae
Pathway
cfer02024  Quorum sensing
cfer03060  Protein export
cfer03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cfer00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    D4Z93_05745
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    D4Z93_05745
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D4Z93_05745
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cfer02044]
    D4Z93_05745
Enzymes [BR:cfer01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     D4Z93_05745
Secretion system [BR:cfer02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   D4Z93_05745
  Eukaryotic Sec-SRP protein
   D4Z93_05745
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA AAA_17 MMR_HSR1 AAA_25 AAA_30 PduV-EutP Arf AAA_18 AAA_16 nSTAND3 APS_kinase cobW Roc AAA_31 GTP_EFTU AAA_33 ArlS_N NPHP3_N ResIII ParM_N ArsA_ATPase TsaE NACHT DUF6331
Other DBs
NCBI-ProteinID: AYD40044
UniProt: A0A386H309
LinkDB
Position
1191803..1193158
AA seq 451 aa
MAFEGLTSKLQGTLKKLRGKGKLSEKDIKDAMREVKLALLEADVNYKVVKDFIKKVSEKS
LGEEVLKSLTPAQQVVNIVNEELKELMGSTQSDIKYGSNGITVIMLVGLQGAGKTTMCGK
LALQLRKKNKKPLLAACDIYRPAAIKQLQVVGKQIDIPVFSMGDKVTPVDISKGAVEYAK
NNGLNVVIIDTAGRLHIDETLMNELKDVKENARPDEILLVVDAMTGQDAVNVADSFNEKL
DIDGVILTKLDGDTRGGAALSIKAMTQKPIKFIGTGEKMSDFEEFHPDRMASRILGMGDV
LSLIEKAKQAIDEDEAKELGTRIMNQEFNLEDFLTSMHQMKKLGPLDKLLEMVPGVTPKE
LKGIDLGNQEKEIAKMEAIINSMTVKERRNPSIISSSMSRKKRIAKGSGTAVQNVNKVLK
DFENMKKMMKQMKGMKKSFNKKSLFGGKMPF
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcttttgaaggattaacgtctaaacttcaaggtacattaaaaaagcttaggggtaag
ggtaaactttcagaaaaagatataaaagatgctatgcgcgaagtaaaacttgcacttttg
gaagcagatgtcaattataaagttgtaaaagactttataaaaaaggtaagtgagaagagt
ttaggagaagaagttcttaaaagtttgactccagcacagcaggttgtaaatattgttaat
gaagaacttaaagaattaatgggcagcactcagagtgacattaaatatggttcaaatgga
attactgttataatgctagttggtcttcagggagctggtaagactactatgtgtggtaaa
cttgcacttcagctgagaaaaaagaataaaaaaccacttcttgcagcatgtgacatatat
agacctgcggccataaagcagcttcaagtagttggaaaacaaatagatatacctgttttt
tcaatgggtgataaggttaccccggttgatatatctaaaggagccgtagagtatgcaaaa
aataatggattgaatgttgttataatagatactgctggaaggcttcatatagatgagact
ttaatgaatgaattaaaggatgtaaaagaaaatgcaaggcctgatgaaatattgttggta
gttgatgccatgacaggtcaagatgcagtaaatgtggctgacagtttcaatgaaaagttg
gatatagatggagtaatactcacaaaactagatggtgatacaaggggaggagcagctcta
tcaataaaggctatgacgcagaaacctatcaagtttataggtactggtgaaaaaatgagt
gactttgaggaatttcatccagatagaatggcgtctagaatacttggaatgggtgatgtc
ctgtctcttattgaaaaagcaaaacaggcaatagatgaagatgaagctaaagaattagga
acaaggattatgaatcaggaatttaatcttgaggattttttgacttctatgcatcaaatg
aaaaaacttggaccattagataagcttcttgaaatggtacctggtgttacacccaaagaa
ttaaagggtatagatttaggcaatcaggaaaaggaaattgcaaaaatggaagccataata
aattctatgacagtgaaggaaaggagaaatccttctataatatcttcttctatgtccagg
aaaaagagaatagctaaaggctcaggtactgcagttcaaaatgtaaataaagtattaaaa
gattttgaaaatatgaaaaagatgatgaaacagatgaagggtatgaaaaagtcatttaac
aagaaaagcttatttggtggtaagatgcctttctag

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