Clostridium fermenticellae: D4Z93_06255
Help
Entry
D4Z93_06255 CDS
T06956
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K06306
cortical fragment-lytic enzyme [EC:3.2.1.-]
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
D4Z93_06255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Glyco_hydro_18
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
AYD40140
UniProt:
A0A386H380
LinkDB
All DBs
Position
1296385..1297671
Genome browser
AA seq
428 aa
AA seq
DB search
MKIYVVKSGDSVWSIARRYGVTPQSIISANELSNSDTLVVGQSLVIPTKEGVYVVKPSDS
LWSISNKFGVSVQSIIELNDLMSPFRIFPGQNLRIPEYSKNYGTIEANAFIQPSTPDRER
EILREPIKNLTYLTPFSHHITESGGLTPLNDSTIIEEAKANGVAPMLSVTNISGSNFDTQ
LVSRILNNENLQETLINNIIDLIRKKSYFGVIVDFERIPPADRQKYNDFLRRLAQKLHPL
GYIIATALAPKTYDVLEGAWHGAHDYKAHGEIVDFVIIMTYEWGWSGGPPMAVAPIDEVR
KVINYAVSVIPPYKIMIGIPLYGYDWTLPYTPGGEFAESIGNQEAIDRARQYKQSIKYDQ
KSQSPYYNYFDAGGREHVVWFEDARSVREKYRLVSQYGLRGISYWVLAQPFPQNWQILSN
MFNIRKVT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatatatgtggttaaatcaggtgattccgtatggtctatagctagaagatatgga
gtaacaccacagagtataataagtgcaaatgagctttctaattcagatactttggttgtt
ggacaaagcttggttataccgaccaaggaaggagtgtatgttgtcaaaccatcagatagc
ttgtggtcaatttcaaacaaatttggagtttctgttcagagtataattgaattgaatgat
ttaatgagtccatttaggatttttccaggtcagaatttaagaattccggaatatagtaaa
aactatggcacaattgaggctaacgcatttatacaaccttcaactccagatagagaaagg
gaaatattaagagaacctataaagaatttaacatatctaactccatttagtcatcatatt
acagaaagtggtgggcttacaccattaaatgattcaaccataattgaagaagccaaagct
aatggtgtagcaccaatgctttccgttacgaatatttctggtagtaattttgatacccag
cttgtaagcagaatactaaataatgaaaacctgcaggaaactctaataaataatattatc
gatttaataaggaaaaaatcttattttggagtaatagtagattttgagaggatacctcca
gcagataggcagaagtataatgattttttgaggagacttgcccaaaaacttcatcctctt
ggatatattatagctacagctttggctcccaagacgtatgatgttttagaaggtgcatgg
catggtgcacatgactataaagcacatggggaaatagttgattttgtaataataatgaca
tacgagtggggatggtcaggcggaccacctatggctgtagccccaattgatgaagtaaga
aaagtaataaattatgctgtttctgtaatacctccatataaaattatgattggtattcca
ctatatggatatgactggacacttccatatacgccaggaggagagtttgcagagagtata
ggaaatcaagaagcgatagatagagcacgacaatacaagcagtctataaaatatgatcaa
aaatctcaatcaccatattataattattttgatgctggtggaagggaacatgtagtatgg
tttgaagatgcgcgtagtgtcagagaaaagtataggcttgttagccagtatggattgcgg
ggaataagttattgggtattagcacaaccatttcctcaaaactggcagatattaagtaac
atgttcaatataagaaaggttacttaa
DBGET
integrated database retrieval system
