Clostridium fermenticellae: D4Z93_06460
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Entry
D4Z93_06460 CDS
T06956
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfer03400
]
D4Z93_06460
DNA repair and recombination proteins [BR:
cfer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D4Z93_06460
Archaeal homologous recombinant proteins
D4Z93_06460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_27
SMC_N
AAA_15
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AYD40180
UniProt:
A0A386H3C2
LinkDB
All DBs
Position
1348162..1351095
Genome browser
AA seq
977 aa
AA seq
DB search
MKINKLKIGSFGKFKDYSLDLKSGFQLVYGENESGKSTIMAFIKMMFYSKLERGRDINKN
LRKKYRPWDGSNMNGVIEFYDGKTHYSFQKDMGLTPKSDKIKLINMDNGEEVLLGKDEEV
GKRFFGLNLSGFERSSYISNIGSFSADGNGDDVAEKLMSNLVSSGDEDVSEKLVFKRING
AVEDMKSKSGKKGILVDTENELNVLYNKLSEVKALEDEQSDNLREYDALKKELHKQENID
NMIKVKEIKDRLNKIDSLIEKILDYSNLEKDICKGKIKFNELKQFLRECSMLMDESEKLK
GSFEKLKSSIDGGKSLMPFSKKEYECINELVLKKNRLENLLDRINKFLFPNFKSYKMSED
NYSKLKNSLNKHTELIEQFKKYHMDYKKYEEDRESKIRQKDTIVHEFERNKIEWNSRRQV
LDEKIKFLNEKESVYEVQKDRTKGESKSHNKFFILSISIAAIFVIMALVINHISLIGVAV
VILIASYLFENHNSGSVKYKYEDQNSDIKNNDELKNIKTEYKRNEEYISDKTKEYKSRIE
IISDSIVKIEENLKLTKGKNDYYLNLLGKFLDIKNNHDIALNNLYIKKEALIKELNYVNN
EYSEELGLNKKNEISNASVKNFDKEYVISYENMIKDLLSSLEDDILKKMQEKSVSSIEEY
NEKYLYYMSNIKSKEAVNKIEDEYLKKHQQFLDKVNKYQDVKDYEAAKVLIKGLIEKVSI
IENRKKEVSDIAEGMGYSLPSYDSLNAEKMKLEDYIVSYKGEYEKERSYSMEELKEKQKY
FLDRHIGDRLLEIQKRVRTPDKNSINIEREIEEKKNELERKNDYYNSLKAALEVVSEASD
EMRSSFSPELNRKTSEIFKSLSNGKYDNILVSKDYDMSIKSGIHYREWKYLSNGTVDQSY
FALRLAITELISSKNTSLPLFLDDVLMQYDDQRLKAALKFLSSYSVKRGSDFQLILFTCH
KNIIETAGDYTQNIVKI
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaacaaacttaagataggtagttttggtaaatttaaagattatagtttggat
ttaaaaagcggttttcaattagtctatggtgagaatgaatccggaaaatcaaccattatg
gcatttattaaaatgatgttttacagtaaacttgaaaggggaagagatataaataaaaat
ctcagaaaaaaatataggccgtgggatggctccaatatgaatggtgtcatcgaattttat
gatggtaaaacgcattatagctttcagaaggacatgggtttaactcctaaatcggataaa
attaaattgattaatatggataatggtgaagaggtgctcctagggaaagatgaggaagtg
ggaaaaaggttttttggacttaatttatctggatttgagcgcagttcatatataagtaat
attggaagtttctctgcagatggaaatggtgatgatgtagcagaaaaattgatgtcaaat
ttggtttcatcaggagatgaagatgtatcggaaaaacttgtttttaaacgtataaatggt
gcagtagaagatatgaaatcaaaaagtggtaaaaaaggaatacttgttgataccgaaaat
gaattaaatgttttatataataaactgtctgaagttaaagcacttgaggatgagcagagc
gataatttgagagaatatgatgcactaaaaaaagagcttcataagcaggaaaatatagat
aatatgattaaagtcaaggaaattaaagacagacttaacaaaatagattctcttatagaa
aaaatattagattatagtaatctggaaaaagatatttgtaaagggaagattaagtttaat
gaattaaagcaattcttaagggaatgtagcatgctcatggatgaaagtgaaaagcttaag
gggagttttgaaaagctcaaatcatcaattgatggtggaaaaagcttaatgccatttagt
aaaaaagaatatgaatgtataaatgaactcgtattaaaaaagaatagattagagaattta
ctggacaggattaacaaatttttatttccaaattttaaatcatataagatgtcagaagat
aattatagtaagcttaaaaattctctaaataaacatacagaactcatagaacaatttaaa
aaatatcatatggattacaagaaatatgaagaggatagggaaagtaaaatacgtcaaaag
gataccattgtacacgaatttgaaagaaataaaatagaatggaattctagaaggcaggta
ttagatgagaaaattaagtttttaaatgagaaggaatcagtgtatgaggtgcaaaaagac
agaactaaaggagaaagtaaaagccataataaattctttattttaagcataagtattgct
gctatttttgtaataatggctttagttataaaccatatttcattaataggagtggctgtt
gttattttaatagcttcgtatctgtttgaaaatcataattcaggcagtgttaaatacaaa
tatgaagatcagaactcagatataaaaaataatgacgaacttaaaaatattaaaactgaa
tataaaaggaatgaagagtacatttctgataaaacaaaagaatataaaagtagaatagaa
attatatcagacagtattgtaaaaattgaagaaaatctaaaattaactaaagggaaaaat
gattattatttaaacctgctgggaaaatttttagatataaaaaataatcatgatatagct
ttaaataatttatatatcaaaaaggaggctttgattaaagaattaaactatgtaaataat
gaatactctgaagaattaggtttaaataaaaaaaatgaaatatcaaatgcaagtgttaaa
aattttgataaagaatatgtgatttcctatgaaaatatgataaaggacttattaagctca
ctagaggacgatattcttaaaaaaatgcaggaaaagtcagtttcatctatagaggaatat
aatgaaaagtatctttattatatgtccaatataaaaagcaaagaagcagtaaataagatt
gaggatgaatatttaaaaaagcatcagcaatttttagataaagtaaataaataccaggat
gtaaaggattatgaagcagcaaaggttttgataaaaggacttatagagaaagtcagtatc
attgaaaataggaagaaagaggtatctgatatagcagaaggtatgggatatagcttgcct
tcatatgatagcttaaatgcggaaaagatgaaacttgaggattatatagttagctataag
ggtgaatatgaaaaagagagaagctattctatggaagaattaaaagaaaagcaaaaatat
tttttagacaggcatattggagatcgtcttcttgaaatccagaagagagtaaggacacct
gataaaaactcgattaatattgagagagagatagaagaaaagaaaaatgagctagaaaga
aaaaatgactactacaattcactcaaggctgcattagaagttgtaagtgaagcatcagac
gaaatgagaagcagcttcagtccagaacttaatcgtaaaacgtcagaaatatttaaaagt
ctcagtaatggtaaatacgataatatccttgtttcaaaagattatgatatgtcaattaaa
tcaggtattcactatagagagtggaaatatttaagtaatggaactgttgaccagtcctat
tttgcactcagactggcaattacggaactaatatcatctaaaaatacttcactgccatta
tttttagatgatgttttgatgcagtatgatgaccaaaggcttaaggcagctttaaaattc
ttatcttcttattcagttaaaagaggaagtgattttcagcttattttgtttacctgccac
aaaaatataatagaaactgcaggggattatactcagaatatagttaaaatctga
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