Clostridium fermenticellae: D4Z93_07150
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Entry
D4Z93_07150 CDS
T06956
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfer03009
]
D4Z93_07150
Enzymes [BR:
cfer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
D4Z93_07150
Ribosome biogenesis [BR:
cfer03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D4Z93_07150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ntox25
Motif
Other DBs
NCBI-ProteinID:
AYD40309
UniProt:
A0A386H3L3
LinkDB
All DBs
Position
complement(1513538..1514251)
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AA seq
237 aa
AA seq
DB search
MRERLQKYMAACGIASRRKCEGIILNGRVTVNGGIIKELGVKIDPQKDEIRLDGKIIKNE
VSKVYIALNKPEGYLSSVSDERGRSTIIDLIDIKERIYPIGRLDYNTSGLILLTNDGDIY
NRVIHPREEKNKVYLAMIEGNPDESDIKKFESGINIDGFITSNAKFKIIKNNRKSSNVKI
TIHEGKKRQIRKMCIKIGHPVISLKRVQIGNIKLGDLKEGEWRYLCEQEVNSLRSRK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaagacttcaaaaatatatggcagcctgtggaatagcttctagaagaaagtgt
gaaggaattatacttaatggtagggtcacagtaaatggtggcataattaaagaacttgga
gtaaaaattgatccacagaaagatgaaattagactggatgggaaaattattaaaaatgag
gtatctaaggtttatattgcattaaataagcctgaaggttacttatccagcgtgagtgat
gaaagaggaagaagtacaataatagatttaatagatataaaagagagaatatatcctata
ggtagactggattataatacttctggattgatacttcttacaaatgatggggatatatat
aacagagtgattcacccaagagaagaaaagaataaagtatatctggctatgattgaagga
aatccagacgaatcagatataaaaaaatttgaaagtggtataaatatagatggatttata
acatcgaatgctaaatttaagattataaagaataataggaagtcttctaatgttaaaata
actattcatgaagggaaaaaaaggcaaatacgaaagatgtgcattaaaataggtcatccg
gttataagtttaaaaagagtacagataggaaatataaaacttggtgatcttaaggaaggt
gaatggcgttatttatgtgaacaggaagttaatagtttaagaagcagaaagtaa
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