KEGG   Clostridium fermenticellae: D4Z93_07630
Entry
D4Z93_07630       CDS       T06956                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cfer  Clostridium fermenticellae
Pathway
cfer03030  DNA replication
cfer03430  Mismatch repair
cfer03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cfer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D4Z93_07630
   03430 Mismatch repair
    D4Z93_07630
   03440 Homologous recombination
    D4Z93_07630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfer03032]
    D4Z93_07630
   03400 DNA repair and recombination proteins [BR:cfer03400]
    D4Z93_07630
Enzymes [BR:cfer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D4Z93_07630
DNA replication proteins [BR:cfer03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D4Z93_07630
DNA repair and recombination proteins [BR:cfer03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D4Z93_07630
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 PLAC Rgg_C
Other DBs
NCBI-ProteinID: AYD40400
UniProt: A0A386H3Y5
LinkDB
Position
1638418..1639044
AA seq 208 aa
MKMIFFDTETTGIRPGNICQLSYILVDTYTKPNKTTGNNIFFKVNYVEPGAEKIHGFSVE
TLNKLSHGKNFKDQLDKFLYDFKNADILIGHNVNFDIKFLSTELKECSEQLIPKHTFCTM
NYYKNICNLKNKYNECKMPKLEEVIKFLHITNSDINALSKKYFKGSGNFHDARFDTTATY
LTVTEGIRNGYIPKRYFSNMLKNEISTD
NT seq 627 nt   +upstreamnt  +downstreamnt
atgaaaatgatattttttgatacagaaactactggaatacgtcccggtaatatatgtcaa
ctgagttatatacttgttgatacttatacaaaacctaataaaactacaggtaacaatatt
tttttcaaagtaaactatgttgaaccaggtgcagaaaaaattcatggctttagtgttgaa
accttaaacaaactaagtcatggtaaaaattttaaagatcagttagacaaatttttatat
gattttaaaaatgcagatattttgataggacataatgtaaatttcgatataaaattttta
tctactgaactcaaggaatgcagcgaacagttaattccaaaacataccttctgcacgatg
aattattacaaaaatatatgcaatttaaaaaacaaatataatgaatgtaaaatgccaaag
cttgaagaagttataaaatttctacatataacaaattctgatataaatgcattaagtaaa
aaatactttaaaggcagtggaaactttcatgatgccagatttgatacaacagcaacatat
ctcaccgtcactgaaggaattagaaatggttatataccaaaaagatatttctcaaatatg
cttaaaaatgaaataagtactgattaa

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