Clostridium fermenticellae: D4Z93_08565
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Entry
D4Z93_08565 CDS
T06956
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfer03036
]
D4Z93_08565 (xerD)
Chromosome and associated proteins [BR:
cfer03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
D4Z93_08565 (xerD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
AYD40577
UniProt:
A0A386H4B9
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Position
complement(1848690..1849568)
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AA seq
292 aa
AA seq
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MNNILFGYVEYLENKNVSKNTLDAYVRDVTKFSNFINSRNEVITEIEVVSVMAYVQYLQK
EGRATSSIIRNIVSLRSFYKYLFLNGIVSENPVLNYEMPKVKHNIPRILTIEDVDRLLDA
PDITTEKGIRDKAMLELMYATGMKVTELLNVTIYDINMKFNYVKCNGFKSKERIIPIGSV
AIKYLNGYFKIRSDLNKYNLDYLFLNMKGMRMTRQGFWKIIKHYAKQSGISKYMTAFTLR
HSFAVHLLQNGADIKSVQELLGHKDLSATQIYSTISRKNKIAEVYKKTHPRA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattttatttggatatgttgaatatctggaaaataagaatgtaagtaagaat
acattggatgcatatgtaagagatgtaactaaattttctaattttataaatagcagaaat
gaagtaataactgaaatcgaagtcgtttcagttatggcttatgtacagtatcttcagaaa
gaaggtagagccacatcatctattattagaaatatagtatctcttagaagcttttataaa
tatctttttttaaatggaattgtaagtgagaatccagttttaaattatgagatgcctaag
gttaaacataatattccaaggattcttacaatagaagatgtggataggcttttggatgca
cctgatattacaacagaaaaaggcataagggataaagctatgcttgaattaatgtatgct
actggcatgaaagtcacggaattgttaaatgtaactatttatgatataaatatgaagttc
aattatgtaaagtgtaatgggtttaaaagtaaagaaagaataataccaattggatcagtt
gcaataaaatatttaaatggttattttaaaataaggtcggatctaaataaatataaccta
gattatttatttttaaatatgaaaggtatgagaatgacaagacagggattttggaaaata
attaagcattatgctaagcagtcaggtataagtaaatatatgacagcatttacacttaga
cattcttttgcagtgcaccttttgcaaaatggcgcagatataaaatctgtacaggaactt
ttaggacataaggatttgtcggccacacaaatatactctaccatttcaagaaaaaataaa
attgcagaggtctataagaagactcatccgagagcgtaa
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