Clostridium fermenticellae: D4Z93_08875
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Entry
D4Z93_08875 CDS
T06956
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cfer
Clostridium fermenticellae
Pathway
cfer00550
Peptidoglycan biosynthesis
cfer01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D4Z93_08875
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfer01011
]
D4Z93_08875
Peptidoglycan biosynthesis and degradation proteins [BR:
cfer01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
D4Z93_08875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AYD40636
UniProt:
A0A386H4P6
LinkDB
All DBs
Position
complement(1899858..1902047)
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AA seq
729 aa
AA seq
DB search
MAKREYRDKVIVRKRMVVIFCFLLLLLCGLIGRMIYVMVYQSPKLKSIAIAQWTSEVKID
AKRGKILDRNGHELAVSANVYRIDLDMNTLRQTMKEKNLSQDKVASELASALSMDKAEVS
KKLSKTLPGGLPLASLNLKRRVDKEQADNVRNLNLKGILVSADTKRYYPNNNFLAQVLGH
TNSDGNGLTGVELYYNKQLSGTPGVRISETDRKSEGLPYTISDYTKPVDGKNVVLTIDEM
IQGFCEKIATQAMNDNKAKAVSIIVMNPKNGEILAMVNKPDYNPNDPWIKGKPYDELQKM
WRNRTVSDTFEPGSIFKVITASTALEEGIVNQNTKFSCNGRIIIGNRTIHCWKSSGHGTQ
SFADILKNSCNVGFAELGKMIGKETLNKYIQKFGFGQKTGIDLPGEAKGIIKKTQNITDI
DLATISFGQANTVSAIQYLTAVNAVANGGTLITPHVMKEITHYDDLTKENVIDQTFDVSG
NNSRKILDSSKMAELRGYLENVVIAGGGKNAFIEGYHIAGKTGTAQKAGVGGYQAGKYVS
SFVGMAPANDPKVTVLLSIDEPDPSNYYAAQTAAPAAKLVFNDIFNYMGIKGDKTQEETE
KSMLKDVVIPDVRGMKKEDAQKLLKDAKLNTELDNNGEYIVDMNPKPGYTVKEGDKIILY
TGSAENYNKVVAVPDITGLSPEKAVEVFQSVGLKANFEGEGIVSDQSVEPGKQVKKGTTI
DVTADPACD
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaagagaatatagagataaagttattgtaagaaaaagaatggtagttatcttt
tgttttcttttattattattgtgtggtctcataggaagaatgatatatgtaatggtatat
caatcacctaaactaaaatcaatagcaatcgcgcagtggacaagcgaggtaaaaatagat
gctaagcggggaaagatattggatagaaatggacatgaacttgcagtaagtgcaaatgtc
tatagaattgatctggatatgaatactttaagacagacaatgaaagaaaaaaatttgtct
caagataaagtcgcatctgaactagcatccgcgctatctatggataaagctgaggtatct
aaaaaattaagtaaaactctcccgggaggacttccgcttgcttctttaaatttaaagaga
agagtagataaagagcaagctgacaatgttagaaatttaaatttgaagggtattttagta
tcggctgatactaaaagatattatcctaataataatttcctggctcaggttttaggtcat
actaattcggatggaaatgggcttacaggagttgagctttattataataagcaactttct
ggtacaccaggagttaggatttctgaaacagacaggaagagtgaagggcttccatatacg
atttcggattatacaaaacctgtagatggaaaaaatgtagttcttactatagatgaaatg
attcagggattttgtgaaaaaattgcaactcaggctatgaatgacaataaggctaaagcg
gttagtataatagtaatgaaccctaaaaatggtgaaatacttgctatggtaaataagcca
gattataatccaaatgatccgtggattaaaggaaaaccttatgatgaacttcaaaagatg
tggagaaataggacagttagtgatacatttgaaccgggttcgatatttaaagtaataacg
gcttcaacagctcttgaagaaggaatagtaaatcagaataccaagttttcatgtaatgga
cgcataattataggcaatagaacaatacattgctggaagagttcaggacatgggactcaa
agttttgctgatatacttaaaaattcttgcaatgtcggatttgccgagcttggaaagatg
atcggaaaggaaacattaaataaatatatacagaaatttggattcggacaaaaaacaggt
atagatcttcctggcgaagctaaaggcataatcaagaaaacacaaaatataactgatatt
gatcttgcaaccatttcgtttggccaggcaaatacggtttcggcaattcagtatctaact
gcggttaatgcagtagcaaatggaggaactcttataacaccgcatgtaatgaaggagata
actcattatgatgatttgacaaaagagaatgtgatagatcagacatttgatgtttcggga
aacaacagtagaaaaatattggattcaagtaagatggctgaattaagaggatatcttgaa
aacgtagttatagcaggtggaggaaaaaacgcttttatagagggatatcatatagccggg
aaaacgggaactgcacaaaaagccggggttggaggttatcaagccgggaaatatgtatct
tcatttgttggaatggcaccagcaaatgatccaaaagtgacggttttgctgtctatagat
gagccggatccatccaattattacgctgcacaaactgcagctcctgcagctaaactggtt
ttcaatgatatattcaattatatgggtataaaaggtgataaaactcaggaagaaacagag
aaaagtatgcttaaggatgtagttattcctgatgtcaggggaatgaagaaggaagatgct
caaaaattattaaaggatgctaagttaaacactgaacttgataataatggtgagtatata
gtagatatgaatcccaaacctggatatacagtcaaggaaggagataaaattatactttac
acaggaagcgcagaaaactataataaagtagtagctgttcctgatataactggattaagt
ccggagaaggctgttgaagtatttcagagtgtaggattaaaggcgaactttgaaggagaa
ggtatagtatcagatcagagtgttgaaccaggaaaacaggtaaaaaaagggacgacaata
gatgttacggcagatcctgcttgtgattaa
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