KEGG   Clostridium fermenticellae: D4Z93_08875
Entry
D4Z93_08875       CDS       T06956                                 
Name
(GenBank) stage V sporulation protein D
  KO
K08384  stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cfer  Clostridium fermenticellae
Pathway
cfer00550  Peptidoglycan biosynthesis
cfer01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cfer00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    D4Z93_08875
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cfer01011]
    D4Z93_08875
Peptidoglycan biosynthesis and degradation proteins [BR:cfer01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   D4Z93_08875
SSDB
Motif
Pfam: Transpeptidase PASTA PBP_dimer
Other DBs
NCBI-ProteinID: AYD40636
UniProt: A0A386H4P6
LinkDB
Position
complement(1899858..1902047)
AA seq 729 aa
MAKREYRDKVIVRKRMVVIFCFLLLLLCGLIGRMIYVMVYQSPKLKSIAIAQWTSEVKID
AKRGKILDRNGHELAVSANVYRIDLDMNTLRQTMKEKNLSQDKVASELASALSMDKAEVS
KKLSKTLPGGLPLASLNLKRRVDKEQADNVRNLNLKGILVSADTKRYYPNNNFLAQVLGH
TNSDGNGLTGVELYYNKQLSGTPGVRISETDRKSEGLPYTISDYTKPVDGKNVVLTIDEM
IQGFCEKIATQAMNDNKAKAVSIIVMNPKNGEILAMVNKPDYNPNDPWIKGKPYDELQKM
WRNRTVSDTFEPGSIFKVITASTALEEGIVNQNTKFSCNGRIIIGNRTIHCWKSSGHGTQ
SFADILKNSCNVGFAELGKMIGKETLNKYIQKFGFGQKTGIDLPGEAKGIIKKTQNITDI
DLATISFGQANTVSAIQYLTAVNAVANGGTLITPHVMKEITHYDDLTKENVIDQTFDVSG
NNSRKILDSSKMAELRGYLENVVIAGGGKNAFIEGYHIAGKTGTAQKAGVGGYQAGKYVS
SFVGMAPANDPKVTVLLSIDEPDPSNYYAAQTAAPAAKLVFNDIFNYMGIKGDKTQEETE
KSMLKDVVIPDVRGMKKEDAQKLLKDAKLNTELDNNGEYIVDMNPKPGYTVKEGDKIILY
TGSAENYNKVVAVPDITGLSPEKAVEVFQSVGLKANFEGEGIVSDQSVEPGKQVKKGTTI
DVTADPACD
NT seq 2190 nt   +upstreamnt  +downstreamnt
ttggctaaaagagaatatagagataaagttattgtaagaaaaagaatggtagttatcttt
tgttttcttttattattattgtgtggtctcataggaagaatgatatatgtaatggtatat
caatcacctaaactaaaatcaatagcaatcgcgcagtggacaagcgaggtaaaaatagat
gctaagcggggaaagatattggatagaaatggacatgaacttgcagtaagtgcaaatgtc
tatagaattgatctggatatgaatactttaagacagacaatgaaagaaaaaaatttgtct
caagataaagtcgcatctgaactagcatccgcgctatctatggataaagctgaggtatct
aaaaaattaagtaaaactctcccgggaggacttccgcttgcttctttaaatttaaagaga
agagtagataaagagcaagctgacaatgttagaaatttaaatttgaagggtattttagta
tcggctgatactaaaagatattatcctaataataatttcctggctcaggttttaggtcat
actaattcggatggaaatgggcttacaggagttgagctttattataataagcaactttct
ggtacaccaggagttaggatttctgaaacagacaggaagagtgaagggcttccatatacg
atttcggattatacaaaacctgtagatggaaaaaatgtagttcttactatagatgaaatg
attcagggattttgtgaaaaaattgcaactcaggctatgaatgacaataaggctaaagcg
gttagtataatagtaatgaaccctaaaaatggtgaaatacttgctatggtaaataagcca
gattataatccaaatgatccgtggattaaaggaaaaccttatgatgaacttcaaaagatg
tggagaaataggacagttagtgatacatttgaaccgggttcgatatttaaagtaataacg
gcttcaacagctcttgaagaaggaatagtaaatcagaataccaagttttcatgtaatgga
cgcataattataggcaatagaacaatacattgctggaagagttcaggacatgggactcaa
agttttgctgatatacttaaaaattcttgcaatgtcggatttgccgagcttggaaagatg
atcggaaaggaaacattaaataaatatatacagaaatttggattcggacaaaaaacaggt
atagatcttcctggcgaagctaaaggcataatcaagaaaacacaaaatataactgatatt
gatcttgcaaccatttcgtttggccaggcaaatacggtttcggcaattcagtatctaact
gcggttaatgcagtagcaaatggaggaactcttataacaccgcatgtaatgaaggagata
actcattatgatgatttgacaaaagagaatgtgatagatcagacatttgatgtttcggga
aacaacagtagaaaaatattggattcaagtaagatggctgaattaagaggatatcttgaa
aacgtagttatagcaggtggaggaaaaaacgcttttatagagggatatcatatagccggg
aaaacgggaactgcacaaaaagccggggttggaggttatcaagccgggaaatatgtatct
tcatttgttggaatggcaccagcaaatgatccaaaagtgacggttttgctgtctatagat
gagccggatccatccaattattacgctgcacaaactgcagctcctgcagctaaactggtt
ttcaatgatatattcaattatatgggtataaaaggtgataaaactcaggaagaaacagag
aaaagtatgcttaaggatgtagttattcctgatgtcaggggaatgaagaaggaagatgct
caaaaattattaaaggatgctaagttaaacactgaacttgataataatggtgagtatata
gtagatatgaatcccaaacctggatatacagtcaaggaaggagataaaattatactttac
acaggaagcgcagaaaactataataaagtagtagctgttcctgatataactggattaagt
ccggagaaggctgttgaagtatttcagagtgtaggattaaaggcgaactttgaaggagaa
ggtatagtatcagatcagagtgttgaaccaggaaaacaggtaaaaaaagggacgacaata
gatgttacggcagatcctgcttgtgattaa

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