KEGG   Clostridium fermenticellae: D4Z93_09460
Entry
D4Z93_09460       CDS       T06956                                 
Name
(GenBank) DNA topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
cfer  Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:cfer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfer03032]
    D4Z93_09460
   03036 Chromosome and associated proteins [BR:cfer03036]
    D4Z93_09460
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cfer02048]
    D4Z93_09460
Enzymes [BR:cfer01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     D4Z93_09460
DNA replication proteins [BR:cfer03032]
 Prokaryotic type
  DNA Topoisomerases
   D4Z93_09460
Chromosome and associated proteins [BR:cfer03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    D4Z93_09460
Prokaryotic defense system [BR:cfer02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    D4Z93_09460
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C crAss001_48 DUF465
Other DBs
NCBI-ProteinID: AYD40744
UniProt: A0A386H555
LinkDB
Position
complement(2019826..2022696)
AA seq 956 aa
MTKKINIPVDKNIVQIPLEEAMPDNYLPYAVDVAKERAIPDVRDGLKPVHRRIIYGAYML
KAFPDRPYYKSARIVGDILGKYHPHGDSSVYDSMVILAQNFTTRMPLIDGHGNWGSQDGD
CAAAMRYTEARLTNISMEMIRDIDKDVVDMVDNYSGSEKEPEVLPSRYPNILVNGSFGIA
VGLATNIPPHNLNEVIDACVAIIDKPDIDTCGLMNYVKGPDLPTGGILIGKNSLLSAYES
GEGKVTLRAKTNIQRLDNGRLGIVITEFPYRRSKAKLLQTISDMTADKKHSKVLEVISDI
RDESDRTGIRAVIEFKKSVDMGTADKVLKYLFKKTDLQCNISFNMVALADGKPQTMGLKT
ILRHYVDYQKDVVMRRTTTELNIAKKRFHIVEGFIKAIGIMDEVIITIRSSKSKKDAQKN
LIDKFGFTGIQSESILELMLYRLTGLEIKTFEKEYNELCRKINKLQKILSSDRELFKLIK
KELLEIKNKYGDSRRTSIIENDSEAKIEVEDIIVDEDIVVTLSNDGFIKRVSLRSYNRSN
PSVSDIEYREGDFSKFLIKSNTKHSLIFFTNKGNLYKVRGVNVPEFKWKDKGEKIDNIIK
GIDLDQERIIAVYSINDFHDQFQFVFFTNKGGIKKTSLERFDTTYTKIMALKLKNNEELL
NVHIFEESKRYIYIKTKNGLNFTIEIPDICEMDRNIMPFQMFNLSNNDEVNFMKFVNECE
NKSFEIIIDRNGILKSRRDKKLTKNSIKLCTDSSSRILIFTKDGEVYSINARMLQNIEDG
IDIKNIFNGLKKDNILNIFSINKFSDEEYIYFFTKYGMIKKTSLCEFNGNYDLSTAYKFK
RDDDKLIGVYISNGNNEKVILITQKMMCIEFETNNVNPMGKIASGVTGINLNEDDEVIFV
SLLSERDLNRKLLLKLKKSQKITVNISDIRVQNRAGKGKKLFLIDTKDQIISINIV
NT seq 2871 nt   +upstreamnt  +downstreamnt
gtgacaaaaaagataaatataccagttgataaaaatatagttcaaatacctttagaagag
gctatgcctgataattatcttccatatgcagtagatgttgcaaaggaaagagctatccct
gatgtaagggatggtttaaaacctgtgcataggaggataatttatggagcttatatgctt
aaagcatttccagatagaccttattataaatctgcaagaatagttggagatattttgggt
aaatatcatcctcatggagattcatctgtttacgattcaatggtaattcttgcacagaat
tttacaacaagaatgccgcttatagatggacacggcaattggggaagccaggatggcgat
tgtgcagctgcaatgcgttacacggaagccagacttacaaatatttcaatggaaatgata
agggatatagataaagatgtagtcgatatggttgataactattctggatctgaaaaggaa
ccagaggtacttccgtcgagatatcctaatatacttgtaaatggatcatttggtatagca
gttggacttgcaactaatataccaccacataatttaaatgaagtcatagatgcatgtgtt
gctataattgataaacccgatatagatacttgtggattaatgaattatgttaaaggaccg
gatcttcctacaggtggaattttaatagggaaaaattcacttttgtctgcatatgaaagt
ggagagggaaaggtaacactaagggctaaaactaatatacaaagacttgataatggtaga
cttggaatagtaattactgaattcccatataggagaagcaaagcaaaattacttcagact
atttctgatatgacagctgataaaaaacattctaaagtattggaggttatttctgatata
agagacgagtcagatagaactggaataagagctgttatagagtttaagaagtctgtagat
atgggaactgctgataaagtcctaaagtatcttttcaaaaaaactgatctgcagtgcaat
atctcatttaatatggttgcgctcgcggatggaaaaccacagactatgggacttaaaact
atattaagacattatgtagattatcaaaaagatgttgtaatgagaagaactacgaccgaa
ttaaatatagctaaaaagagattccatatagtagaagggtttataaaagcaattggtata
atggatgaggttataattacaataagatcgtctaaatctaaaaaagatgcacagaaaaat
cttatagataaatttggatttacaggtatacagtcagagtcaatactagaacttatgctt
tatagacttacaggtcttgagataaaaacatttgaaaaggaatataatgagctttgcagg
aagataaataaattgcaaaaaatattgagtagtgatagggaattatttaaacttataaaa
aaagaacttttggaaattaaaaataaatatggagatagcagaagaacttcaataattgaa
aatgatagtgaagctaagattgaagtggaggatattatagttgacgaagatattgtggta
acactttcaaatgatggattcataaaaagagtttcattaagatcatacaatcgttctaat
cctagtgtttccgacattgaatatagagagggtgattttagcaaatttttaataaaatct
aatacaaaacattctctaatattttttactaataaaggaaatctatataaagtcagaggg
gtaaatgtgcctgaatttaaatggaaggataaaggtgaaaagatagataatataataaag
ggaatagatcttgatcaagaaagaataatagccgtatacagtatcaatgactttcatgat
caatttcaatttgtttttttcacaaataagggtggtataaaaaagacatctcttgaaaga
tttgatacaacatatactaaaataatggcactaaaattgaaaaacaatgaagaactttta
aatgtgcatatatttgaagaaagcaaaagatatatatatataaagactaaaaatggatta
aattttactattgaaatacctgatatatgtgaaatggatagaaatataatgccatttcaa
atgtttaatctatctaataatgatgaagtcaattttatgaaatttgtaaatgaatgtgaa
aataaaagttttgaaattataattgataggaatggaattctaaaatctagaagagataaa
aagttaacaaagaatagtattaaactttgtactgattcatcgagcaggatattaatattt
acaaaagatggagaagtatattctataaatgcacgcatgctgcaaaatattgaggatggt
atagacattaaaaatatatttaatggactaaagaaagataatattttaaatattttttca
ataaataaatttagtgatgaagaatatatttactttttcacaaaatatggaatgataaag
aaaacatcactgtgtgaatttaatggaaattatgatttgagtacagcttataaatttaaa
agagatgatgacaaattaattggagtctatatatcaaatgggaataatgaaaaagtaata
ttaattacccaaaaaatgatgtgcatagagtttgaaacaaataatgtaaatcctatgggt
aaaattgcatcaggagttactggcataaatttaaatgaagatgatgaagttatttttgta
tcacttttaagtgagagagatttaaatagaaaattattattaaaattaaaaaaaagtcaa
aaaattactgtaaatattagcgatattagagttcaaaatagagctggaaaaggtaaaaag
ctcttcttaattgatacgaaggatcagattataagtataaatatagtgtaa

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