KEGG   Clostridium fermenticellae: D4Z93_09465
Entry
D4Z93_09465       CDS       T06956                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
cfer  Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:cfer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfer03032]
    D4Z93_09465
   03036 Chromosome and associated proteins [BR:cfer03036]
    D4Z93_09465
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cfer02048]
    D4Z93_09465
Enzymes [BR:cfer01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     D4Z93_09465
DNA replication proteins [BR:cfer03032]
 Prokaryotic type
  DNA Topoisomerases
   D4Z93_09465
Chromosome and associated proteins [BR:cfer03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    D4Z93_09465
Prokaryotic defense system [BR:cfer02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    D4Z93_09465
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c
Other DBs
NCBI-ProteinID: AYD40745
UniProt: A0A386H5E9
LinkDB
Position
complement(2022711..2024666)
AA seq 651 aa
MEQWNNKTSVYDVNALTSLEKLEPVRVRPGMYIGSTGSKGLHHCIWEILDNAIDEISNGF
GDTAVVILNKDGSASIKDNGRGIPTGIHPVKKKSGVEMVFTELHTGGKFNNDVYKTSGGL
HGVGAAVVNALSSWLEVEVKQNGHIYSQRFEYRYDKGLKRTMPGTPVDHLKVVGDSSETG
TKVTFMPDRNVFSNIEFKIDIIDERLQELAFQNKGISLKLVDNRGEETVEKYYHSENGLL
DFIRYLNESKTVLHSDPILFDGEREVNGINMYGEICAQFTESTSEYIASYVNNIPTTESG
THESGFKTGMTRAFKEWAKKLNLLKEKSKEFDGDDLREGMTAVIRIKITDPIFEGQTKTK
LGNAEAYTMMNDLSYTKFFEWIEDNKDMATLIINNALYAAARREKIKKINDAEKKKIGRG
TAPLAGKIAVCTIKDSSVCEFIVVEGDSAGGSAKQARDRRFQTIMPSKGKIMNTEKQNLE
NVLGSEELKMFNTAIGTGILENYNEDDLKYDKIIIMSDADVDGFHIRTLWMTYIYRYMRQ
LIMNGHLYIAQPPLYKVYKENKGKNIVKYAYDEEGLKKAKNEIGRGVLIQRYKGLGEMNP
DQLWETTLNPETRTLDKITIDDAAKAEKMVSLLMGEVVAPRKNYMYKYAEF
NT seq 1956 nt   +upstreamnt  +downstreamnt
atggaacaatggaataataaaacatctgtttatgatgttaatgccttaacttctcttgaa
aaattagaacctgttagagtaagaccaggcatgtatataggttccacgggtagtaaggga
ttacatcactgtatatgggaaattttagacaatgccatagatgaaatttctaatggattt
ggagatacagctgtggtgattttaaataaagatggaagtgctagcattaaggacaatgga
agaggaataccaacggggatacatcctgtaaagaaaaaatcaggtgttgaaatggtattt
actgagttacatactggaggaaagtttaataatgatgtgtataaaacctctggaggactt
catggtgttggtgctgctgttgtaaatgcgttgtcaagttggcttgaggttgaagtaaaa
cagaatggacatatatacagtcaaagatttgagtatagatatgataaaggattaaagaga
acaatgccgggaactccagttgatcatttgaaagttgtaggagactccagtgaaactggt
acgaaagtaacatttatgccggacagaaatgtattttcaaatattgaatttaagatagat
attatagatgaaagacttcaagaacttgcattccaaaataaaggaataagtttaaaacta
gtagataacaggggagaggaaactgtagaaaaatattatcattcagaaaatggattgctg
gattttataagatatctaaatgaaagcaaaactgtcctgcattctgatcctatactattt
gatggtgaaagagaagtaaatggaataaatatgtatggtgaaatatgtgcgcaattcaca
gaatccacttcagaatatatagcaagttatgtgaataatattccaacaacagaatcggga
acacatgaaagtggttttaaaactggaatgacaagagcatttaaagaatgggccaaaaaa
ttgaatcttttaaaggagaagtctaaagaattcgatggagatgacttaagagaaggaatg
acagctgtaattagaataaaaataactgatccgattttcgaaggacaaaccaagacaaaa
cttgggaatgcagaagcttatactatgatgaatgatttgagttatactaagttttttgaa
tggatagaagacaataaggatatggcaacgttgattataaataatgccctgtatgctgct
gcgagaagggaaaaaataaaaaaaataaatgatgctgaaaagaaaaaaataggaagaggt
actgcaccgcttgcaggtaaaattgcggtttgtactataaaagattcatccgtgtgtgaa
tttatcgttgtcgaaggagattcagctggtggatcagctaaacaggcaagagatagaaga
tttcaaactataatgccatctaagggaaaaattatgaatacagagaaacaaaatcttgaa
aacgtgcttggaagtgaagaattaaaaatgtttaatacggctataggtacgggtatactt
gaaaattataatgaggatgatttgaaatatgataagataattataatgtctgatgcagat
gttgacggatttcatataagaaccctgtggatgacatacatatatagatatatgagacag
cttataatgaatggacatttatatatagcccagccgcctttatacaaggtctataaagaa
aataaaggtaaaaatattgtaaaatatgcgtatgatgaagaaggacttaaaaaggccaaa
aatgaaattggaaggggagttctgattcaaagatataaaggacttggtgaaatgaatcct
gatcaattatgggaaactacacttaatcctgaaacgagaacacttgacaaaataacaata
gatgatgcggcaaaagctgagaaaatggtatcgcttttaatgggtgaagttgttgcccct
agaaaaaattatatgtataaatatgcggaattttaa

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