Clostridium fermenticellae: D4Z93_10320
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Entry
D4Z93_10320 CDS
T06956
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cfer
Clostridium fermenticellae
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfer03016
]
D4Z93_10320 (truA)
Enzymes [BR:
cfer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
D4Z93_10320 (truA)
Transfer RNA biogenesis [BR:
cfer03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D4Z93_10320 (truA)
Prokaryotic type
D4Z93_10320 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Ribosomal_S2
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
AYD40896
UniProt:
A0A386H5F9
LinkDB
All DBs
Position
complement(2221467..2222204)
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AA seq
245 aa
AA seq
DB search
MRNLKLSIQYDGSKYKGWQKQKEGVLTIQGKLESVLSKMTGEDIQLIGCSRTDSGVHAYD
YTANFHTESNLSVDEMLDYIYKFLPEDIVVKSIKDTSDRFHARYNAKSKTYIYSINNNRF
RDVFERKYVYHIDKKLDVEEMKKAAEILTGTHDFKSFTRLKSSNKSTVKTINYIDISEDN
GLILIEINGNAFLLNMVRIITGVLIEAGLHNITSYDVELILDRKQRDQTIPIAPPKGLCL
KSVQY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttgaaattatcaatccagtatgatggaagtaaatataagggttggcagaaa
caaaaagaaggggttttaactatacagggaaaactcgaaagtgttttaagtaaaatgaca
ggagaggatatacagcttataggatgcagcagaactgattcaggagtccatgcatatgat
tacacagccaattttcatactgaatcaaatttaagtgtagatgagatgctggattatata
tataagtttttacctgaagatatagttgtaaaatcaattaaggatacctctgatagattt
catgccaggtataatgctaaatcaaaaacttatatttatagtataaataataataggttt
agagacgtttttgagagaaaatatgtatatcatatcgataagaaactagatgttgaagaa
atgaaaaaggcagctgaaattttaactggaacacatgactttaaaagctttacaagactt
aagtcgagtaataagtcgactgtaaaaactataaattatatagatataagcgaagataat
ggattgattttaatagagataaatggaaatgcatttttattaaatatggtcagaataatt
acaggagttcttatagaagcaggacttcataatataacttcttatgatgtagaattaata
ttggacagaaaacaaagagatcagacaattccaatagcaccacctaagggattatgttta
aaaagtgttcaatattaa
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