Corynebacterium felinum: CFELI_01605
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Entry
CFELI_01605 CDS
T09308
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cfeu
Corynebacterium felinum
Pathway
cfeu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfeu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFELI_01605 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfeu03021
]
CFELI_01605 (rpoC)
03400 DNA repair and recombination proteins [BR:
cfeu03400
]
CFELI_01605 (rpoC)
Enzymes [BR:
cfeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFELI_01605 (rpoC)
Transcription machinery [BR:
cfeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFELI_01605 (rpoC)
DNA repair and recombination proteins [BR:
cfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFELI_01605 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WJY93964
LinkDB
All DBs
Position
336163..340170
Genome browser
AA seq
1335 aa
AA seq
DB search
MLDVNFFEELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHNDQTTLEAEMLMEKKERETEAETEISERAQKLEED
LAELEAAGAKADARRKVQNAAEKEMQHIRERAQRDIDHLDEVWQTFIKLAPKQMIIDDKI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELRQIINEGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAIAQHPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTMDKAEHEIGGN
GAYKPATSEGPATGMYSSVAEAIMAYDRKELGLQAKIKVRISHLRPPADIEAEQFPDGWQ
KGQTWLADTTLGRIYFNDLLPWNYPYLEGVMVRKGGGSDKIMLGDVINDLAAQYPMITVA
QTMDKMKDAGFYWATRSGVTIAMSDVLVLEDKDERLEKYEAEARKIERKYWEQGALTERE
RYDRLVELWKNATDEVGKAVEAMYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCETRLGIKVPVAQPVKDAEGNVTSHVAHSLIETSVLGRALAVDVKSNDEVVASAGEYLT
EVLVEKLVALGVEEVKVRSVLTCQTATGVCAKCYGISMASGKQVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVHLEDEGNFYTLT
ITPDDGSDDVIYEKLSKRQGLANTRVPMSNNPGAWLERTLTDGDHVEVGDRLLRGPADPH
DVLEILGRRGVEQHLVDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGNTEFLPGT
LVDLAEAKAANAEAIAAGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNITVKPTEAARNAAYSIPTYGDSIYGDDGFG
DFTGASVPLDEAFDM
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgaagaactccgcattggcctggccaccgccgacgacatc
cgccgttggtctaagggtgaggtcaagaagccggaaaccattaactaccgtaccctcaag
cctgagaaggacggcctgttctgcgagcgcattttcggtcctacccgcgactgggaatgt
gcctgcggtaagtacaagcgcgtccgctacaagggcattatctgtgaacgctgtggcgtt
gaggtgaccaagtctaaggtgcgtcgtgagcgcatgggccacattgaattggccgcgcct
gtgacccacatttggtacttcaagggtgtgccttcccgcctcggctacctgctcgaccta
gctccgaaggacctggagcgcatcatctacttcgctgcgaacatcatcaccagcgttgac
gatgaagcacgccataatgaccagaccactctggaagcagaaatgctgatggagaagaag
gagcgcgaaaccgaagcggagaccgaaatctccgagcgcgcccagaagctggaagaagac
ctggctgagctggaagcagctggtgcaaaggcagatgcgcgccgcaaggtgcaaaacgct
gctgagaaggaaatgcagcacattcgtgagcgcgctcagcgcgacatcgatcacctcgac
gaggtgtggcagaccttcatcaagcttgctcctaagcagatgatcatcgacgacaagatc
tacgaagagctcgttgaccgctacgaagattacttcaccggcggcatgggcgctgaggcg
atccagacgctgatccgcaacttcgacctcgacgctgaggctgaggaactgcgccagatc
atcaacgaaggcaagggccagaagaagatgcgtgccctcaagcgtctgaaggttgttgca
gccttccagcgctcgggtaacgatcctgctggcatggtgcttgactgcatcccagtcatc
ccaccagagcttcgcccaatggttcagctcgacggtggccgtttcgccacctccgacctg
aatgatctgtaccgtcgtgtgatcaaccgcaacaaccgcctcaagcgcatgatcgatctt
ggtgctcctgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgttgacgcc
ctgttcgacaacggtcgtcgtggccgcccagtgactggtcctggtaaccgtccgctgaag
tccctgagcgatctgcttaagggtaagcagggtcgtttccgccagaacctgctgggtaag
cgtgttgactactccggtcgttccgttattatcgttggtcctcagctcaagctccacgag
tgtggtctgccgaagctgatggctttggaactgttcaagccgttcgtgatgaagcgcctg
gtcgaaaacgactacgcgcagaacatcaagtcggctaagcgcatggtggaacgtcagcgc
cctgaggtgtgggacgttctggaagaggccattgcgcagcaccctgtgatgctcaaccgt
gcaccaaccctgcaccgcctgggtattcaggctttcgagccgaagctcattgagggtaag
gctattcagctgcacccacttgcctgtgaagccttcaacgccgacttcgacggtgaccag
atggctgtgcacctgccactgtcggcagaagctcaggctgaggctcgcattttgatgctg
gcttcgaacaacattctgtccccagcatctggtaagcctttggctatgcctcgtctggac
atggtgaccggcctgtacttcctgaccatggataaggctgagcacgagatcggcggcaac
ggcgcatacaagcctgcaacttctgagggccctgcaacgggtatgtactcctcggtggct
gaggccatcatggcgtacgaccgcaaggagcttggtttgcaggcgaagattaaggtgcgt
atttctcacctgcgtccgccagcagatattgaggctgagcagttccctgatggttggcag
aagggccagacttggcttgccgataccaccttgggtcgtatctacttcaacgatcttctg
ccttggaactacccataccttgaaggtgtgatggttcgtaagggcggcggctccgacaag
atcatgttgggcgatgtcattaacgacctcgcagcacagtacccaatgattaccgtggct
cagaccatggataagatgaaggatgctggcttctactgggcaacgcgttccggtgtgacc
atcgccatgagcgacgttttggttcttgaggacaaggacgagcgtctggagaagtacgag
gctgaggcccgcaagatcgagcgtaagtactgggagcagggcgctctgaccgagcgtgag
cgttacgatcgtctggttgagttgtggaagaacgccaccgatgaggtgggtaaggccgtt
gaggctatgtatcctgacgacaacccgattccaatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggtggtgaactctcgtggt
gagtacatcactcgcccaattaagacttccttccgtgaaggtctgtcggtgttggagtac
ttcaacaactcccacggttcccgtaagggcctggccgataccgctttgcgtaccgccgac
tcgggttacttgactcgtcgtctggtggacgttgcgcaggatgttattgtgcgtgaggat
gactgtgagacccgcctgggtatcaaggttcctgttgcacagcctgtgaaggatgcggaa
ggcaatgtgacttcccatgttgcgcatagcttgatcgaaacgtctgttttgggtcgtgcg
ttggctgttgatgtcaagagcaatgatgaggttgttgcttctgctggcgagtatctcact
gaggttttggttgagaagcttgttgcgcttggcgttgaagaagtgaaggttcgttcggtt
ctgacctgtcagaccgctaccggtgtgtgtgcgaagtgctacggcatttccatggcctcg
ggtaagcaggttgatatcggtgaggctgtgggtattgttgctgctcagtcgattggtgag
cctggtacccagctgacgatgcgtacgttccaccagggtggtgtcggtggtgacattacc
ggtggtctgcctcgtgttcaggagctgttcgaggctcgtgttccgaagaaccgtgcgccg
attgcttctgtggccggtacggtccacttggaggatgaaggtaacttctacaccttgacc
attactcctgatgatggttcggacgatgtgatttacgagaagctgtcgaagcgtcagggc
ttggctaatactcgtgttccgatgtcgaacaatcctggtgcgtggcttgagcgtacgctt
accgacggcgatcatgtcgaggttggtgatcgtttgctgcgcggtcctgctgatccgcac
gatgtgctggagattctgggtcgtcgtggtgttgagcagcacttggttgacgaagtccag
gctgtttaccgtgctcagggtgtggcgattcacgataagcacattgagatcatcattcgc
cagatgctgcgccgcggtaccgtgattgagtcgggtaatactgagttcttgcctggtact
ttggttgatttggctgaggcgaaggctgcgaacgctgaggcgattgctgctggtggccag
cctgctgagctccgcagtgagatcatgggtattaccaaggcttccttggctaccgagtcg
tggttgtctgctgcgtccttccaggagaccactcgcgtgctcaccgacgctgctattaac
aagcgttcggataagctgatcggtctgaaggagaacgtgatcatcggtaagctgatccca
gctggtacgggtatttctcgttaccgcaacatcactgtgaagccaactgaggctgcacgt
aatgctgcatactccatcccaacttatggtgattccatctacggtgatgatggcttcggt
gacttcaccggtgcgtctgtcccattggatgaagcatttgatatgtaa
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