Corynebacterium felinum: CFELI_03315
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Entry
CFELI_03315 CDS
T09308
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfeu
Corynebacterium felinum
Pathway
cfeu03420
Nucleotide excision repair
cfeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFELI_03315 (pcrA)
03430 Mismatch repair
CFELI_03315 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfeu03400
]
CFELI_03315 (pcrA)
Enzymes [BR:
cfeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFELI_03315 (pcrA)
DNA repair and recombination proteins [BR:
cfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFELI_03315 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CFELI_03315 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
NepR
Motif
Other DBs
NCBI-ProteinID:
WJY94305
LinkDB
All DBs
Position
698418..701762
Genome browser
AA seq
1114 aa
AA seq
DB search
MNVNFSHTHAGMTGHSSIRVDPVTLAGMLGQKFPPTEQQAEVIAAELGPMLVVAGAGAGK
TETMAARVVWLAANGMIEPDRVLGLTFTRKAAQQLSARIRSRLQQLAGIPELAALDPTGT
LARNLSTIAPTVSTYDAFAGKLIAEFGLLLPVEPSSRMISQTELFTIAYDVLANYGGELA
SSLSMDSAVSKLLDLVSELDNHMVAAQDVIEETAPFVDLFEQLPKAPRQRDHLSATMEKY
RDTQLVRLQYLPLAKILKQRLSENNLMTFGEQMSLAAKLAQQHPKVGKILHSRFDCIMLD
EYQDTSHAQRVLLSNLFRGQPVTAVGDPMQSIYGWRGATAANLERFVTDFVHPGQPAAPK
KELTMSFRNPPAVLQLANAVAGTVLGPENDPKRPVQPLVSLPNSAPGEVEFGYYATPEAE
REAVAETLAQAYRQREEGEFTAAVLVRKRGHMAPMALALQEHGVPVEIVGSEGLLDIPEV
ADLIAVATMLIRPTDSHAALRVLTSPMVGLGAHDLQILAKRARNLKGRTQSNDALSQPRT
PMEKLEQIIATTVPEPEESIVGLADAVADLGEAEGYTLKGRAQLARLSSKLRRLRTQALN
QPLPDLFAHIEQVMGIRTEVLSREDPHKDGAAGTSHLDRFHQEVAQFAHIPGTTLNQLLD
YFELARVHDKGLNPGEVHVRADRVQILTAHKAKGLEWKIVCVLHADQDTYAGKVSTWITD
ESKVPSTLRGDAQEELDQSGAPILDTSFLENRKEFADAMKAHIEEFKKGAAEENTRLFYV
AMTRSEHRLIVTASHNPSRKKPLKPYEHFELIAQLRPDAVQQWFDASEHEQGEGPQMTVP
DGYFPQEISTPALETAAHSVTSACQQLPELNTDYEIFTQWEQDVTALIDEQQRLQAAHIE
VELSSELTATDIVALQDNPEHFARRQRRPIPFKPNTYAKRGTAFHSWLEERFSGQSLLDE
DQLPGIDEDMPEEQLEQLKESFLNSPWAFRTPTYVEHPFEVAVDGIVIRGRMDAIFDMGD
GNWMIVDWKTGHPPARAKLATLKMQLAVYRHAWATLHSLPPHKIRAAFFYVSEGILIEDE
ELPSENTLKASINEVVSVPQPPASNQGAHQETQR
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaaacttttcgcacacacacgccggtatgacaggtcacagcagcatccgcgtt
gatcctgtcacccttgctggaatgctggggcaaaaattcccgcccaccgagcaacaagca
gaggtcatcgcagccgaattagggcccatgctggtagtcgcaggcgcaggagcgggtaaa
accgaaacaatggcggcgcgagtcgtgtggctcgctgcaaacggaatgatcgaaccagac
cgtgtgcttggcttaacatttacccgaaaagcagcccaacagctatccgcacgtatccgt
tcacgactccaacaattagcaggtatcccggaactcgcggcattagatcccaccggaaca
cttgcgcgaaacctctcaaccatcgcgcccacggtttccacctacgatgcctttgccgga
aaactcatcgctgaatttggtttgctgctgcccgtggagccttcatcacgaatgatctcc
caaaccgaactgtttacaatcgcctacgatgtactagccaactatgggggtgaactagca
agctcgttgagcatggattcggcagtatcaaaacttcttgatctcgtctccgagctggac
aatcacatggtcgcagcccaagatgtgattgaagaaacagccccgtttgttgatttattt
gagcaactacccaaagccccgaggcaacgcgatcatctcagcgccaccatggagaaatac
agggacacccaactggtgcggttgcagtacttgccactggcgaagatcttgaagcaacgc
ctcagcgagaacaacctcatgacattcggcgaacaaatgtccctcgccgcgaagctggca
cagcagcacccgaaagtcggcaaaatcctacacagccgtttcgactgcatcatgctcgat
gaataccaagacacatcccacgcccagcgggtattgttgtcgaatcttttccgcgggcaa
cctgtcaccgccgtgggcgatcccatgcaatcgatctacgggtggcgtggagcaaccgct
gcaaaccttgaacgattcgtcaccgatttcgttcacccaggccaacctgcagcaccgaaa
aaagaactcaccatgagtttcagaaacccaccggctgttttacagttggcaaacgccgta
gccggaaccgttttgggcccagaaaacgaccccaaacgcccagtacaaccactagtgtct
ttacctaattcagcaccaggagaggttgaattcggatactacgccaccccagaggcagaa
cgtgaagcagtcgccgagacacttgcacaagcctatcggcagcgggaggaaggtgaattt
accgccgccgtactggtgcgtaaacgcggacacatggcaccaatggcccttgccctccaa
gaacacggcgtgccggtggaaatcgtgggaagtgaaggcttgctcgacatccccgaagtt
gctgatctcatcgctgtagccacgatgctgattcgccccaccgattcacacgcagcgctt
cgtgtcttaacctcacccatggtgggactaggcgcgcacgacctgcagattcttgccaaa
cgtgcccgcaacttgaaagggcgcactcagagcaatgatgcactttcgcagccacgaacc
ccgatggagaagctcgaacagatcattgccaccaccgttcccgaacccgaagagtccatc
gtggggcttgccgacgccgtcgccgatcttggcgaagcagaaggatacaccctaaagggg
cgggcacaactagcacgcttgagctctaagctacgccgactgcgcacccaagccctcaac
cagccacttcctgatctgttcgcacacatcgaacaggtgatgggaatccgtacagaagtg
ctcagcagggaagaccctcacaaagatggtgcggcaggaacctcacacctcgatcgtttc
caccaagaagtagcccaattcgcacacatacctggcaccaccttgaaccagctactggac
tatttcgagctcgcgcgagtgcacgataaagggttaaaccctggcgaggtacatgtacgt
gccgatcgtgtgcagattctgactgcacataaagcgaaaggcctagagtggaaaatcgtc
tgtgtgcttcatgccgaccaagacacctacgcaggcaaagtgagcacatggattacggat
gagtcgaaggttccgtcaacgttgcgtggtgatgcacaagaagagttggaccaatccggt
gcccccattttggatacgtcgtttctggaaaaccggaaagagtttgcagacgcgatgaaa
gcacacatcgaggagtttaaaaaaggcgccgcagaggaaaatacgcgactattttacgtg
gcgatgacacgaagcgaacacagacttatcgttactgcctcacacaatccttcacggaaa
aaaccactgaaaccttatgagcattttgaactcatcgcacaactgcgccctgatgccgta
cagcagtggtttgacgcgagtgaacatgaacagggcgagggaccacaaatgacagtcccc
gatgggtacttcccacaggaaatatccacacctgcgcttgaaacagcagcccacagcgtg
acttcggcatgccaacaattgcctgagttaaataccgattacgaaattttcacccagtgg
gagcaagacgtcaccgcactcattgacgagcagcaacgactccaagccgcacacatagaa
gtagaactgtcctctgagctcacagccacagacatcgtggccttgcaagacaacccagaa
cacttcgcccgcaggcagcgacgccccatcccgttcaaacccaatacctatgccaaacgc
ggaaccgctttccactcgtggctagaagagcgattctcaggacaaagccttttggatgaa
gaccaactaccaggcatcgatgaggacatgcccgaagaacaactcgaacagctgaaagaa
tccttcctcaactcaccgtgggctttccgcacaccaacatacgtggaacatccattcgag
gttgcagtagacggcattgtcatccgcggacgcatggacgccatattcgacatgggagat
gggaactggatgatcgtagactggaaaacagggcacccaccagcccgcgcgaaactcgcc
acactgaaaatgcagcttgccgtctaccgccacgcatgggccactcttcatagcttgcca
cctcataaaatccgagccgcgttcttctacgtcagcgaaggaatactcatcgaagatgaa
gaattaccaagcgaaaacacgctgaaagcaagcatcaatgaggtagtctccgttccccaa
ccccctgccagcaatcaaggagcacaccaggaaacacaacgctga
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