KEGG   Corynebacterium felinum: CFELI_05210
Entry
CFELI_05210       CDS       T09308                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
cfeu  Corynebacterium felinum
Pathway
cfeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFELI_05210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfeu03021]
    CFELI_05210
   03019 Messenger RNA biogenesis [BR:cfeu03019]
    CFELI_05210
Transcription machinery [BR:cfeu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CFELI_05210
Messenger RNA biogenesis [BR:cfeu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CFELI_05210
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N AAA_25 Spore_III_AA NACHT
Other DBs
NCBI-ProteinID: WJY94670
LinkDB
Position
1124898..1126907
AA seq 669 aa
MTTTDTGAPRNLAAMRLPELRKMAADLGLKGVSALRKGDLITAISGATTGSAEAAPAKKT
TQKRATTTQASTPAGDADAPSQEVAQESKPRRRVTKNVAEAAHTPAHDNQEAEDSRPRRR
RVTKTSPTSTVEPAETALSEAPAARDEAESTENQGETAETKYESRSAARRARRNRARREE
REARRRHDRPVKDEENVTEVANATVVDATATTTEPAAVATERTERTERTERAERGERHGR
GERGDRFDRYERRNRRNRRGRDRDNEDRDFRDNRDEREENLQDVAGILDIVDSNVAFVRT
SGYHAGPADVYVNNQMIRRLGLRAGDHIVGAVRMNDGGEQRGHYNRGRNRQKYNPLVRVD
SVNSMTVEEAKARPDFNKLTPLYPNQRLRLETDPKILTTRVIDLIMPIGKGQRALIVSPP
KAGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVISSTFDRPPGEHT
AVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRF
LGAARNIEDGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDV
NPSGTRKDELLLAPEEARIMHKLRRILSALDNQQAIDLLIKQLKKTKNNREFMVQVASSS
IMAADAEEE
NT seq 2010 nt   +upstreamnt  +downstreamnt
gtgaccacaacagataccggcgcaccgcgtaatctcgctgcaatgcgcctaccagaactg
cgtaaaatggctgcagatctggggctcaaaggtgtttccgccctgcgtaagggcgacctg
attaccgcaatcagcggtgccactacaggatcagccgaggctgctcctgcgaaaaaaaca
acccagaagcgcgccaccacaactcaggcgagtaccccagctggcgacgccgacgcacca
tcacaggaagtggctcaagaatccaagccacggcgtcgagtaacaaaaaatgttgccgaa
gctgcacacaccccagcccacgacaaccaggaagctgaagactcacgcccacggcgtcgt
cgggtaaccaagacttcccccaccagcaccgtcgagccagctgaaaccgccctcagcgag
gcaccagctgcccgcgacgaagcagaaagcactgagaatcagggcgagaccgctgaaacg
aagtacgagtcccgctccgcagcgcgccgggctcgtcgcaaccgtgcgcgtcgtgaagag
cgtgaagcacgacgtcgccacgatcgaccagtgaaagacgaagaaaacgtcaccgaggtc
gctaacgctactgtcgttgacgctaccgcgaccaccactgaaccagctgcggttgccacc
gagcgcaccgaacgcaccgagcgcactgagcgtgcagaacgcggtgagcgccacggacgt
ggcgagcgaggggatcgttttgatcgctacgagcgtcgcaaccgccgtaaccgccgtggg
cgcgatcgtgacaacgaagatcgcgatttccgcgacaaccgcgacgagcgcgaagaaaac
ctccaagatgtcgcaggtatcctcgacatcgtcgatagcaacgtcgcattcgtacgtacc
tccggctaccacgctggccctgcagacgtgtacgtcaacaatcaaatgattcgccgccta
ggcctgcgtgccggcgaccacatcgtcggtgccgttcgcatgaacgacggcggcgaacag
cgcggacactacaaccgtggccgcaaccgtcaaaaatacaacccactggtgcgcgtcgac
agcgttaattccatgaccgttgaagaagcaaaggcacgcccggacttcaacaagctcacc
ccgctgtacccgaaccagcgtctgcgcctcgaaactgatccgaagatcctcaccacccgt
gtgatcgacctgatcatgcccatcggtaagggccagcgcgcgctgatcgtttccccacca
aaggccggcaagaccaccatcttgcaaaacattgccaacgcaatcgcgacgaataaccca
gagtgctacctgatggttgtgcttgtcgacgaacgccccgaagaagtcaccgacatgcag
cgcagcgtcaagggtgaagtcatctcctccaccttcgaccgcccaccaggagagcacacc
gcagttgcagaactggccatcgaacgtgccaagcgtctcgtggaacagggccaagatgtt
gtcgttcttctcgactcgattacccgcttgggtcgcgcctacaacaactcctcgccagct
tctggccgtatcctttccggcggtgtggattccaacgcgctgtacccgcccaagcgattc
ctgggtgctgcccgcaacatcgaagatggcggctcgctgaccatcatcgccaccgccatg
gtcgaaaccggctctgcaggcgataccgtgatcttcgaagagttcaagggcaccggcaac
gccgagctcaagcttgaccgcaagatcgcagagcgccgcgtcttcccagcggtcgacgtc
aatccttccggcacccgcaaggacgaactgctgctggctcctgaagaagcccgcatcatg
cacaagctgcgccgaatcctctctgccctcgacaaccagcaggccattgatttgctgatc
aagcagctgaagaagaccaagaacaaccgtgaattcatggttcaggtcgcatcgtcgtcc
atcatggccgcagacgccgaggaggagtaa

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