Corynebacterium felinum: CFELI_08890
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Entry
CFELI_08890 CDS
T09308
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cfeu
Corynebacterium felinum
Pathway
cfeu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFELI_08890 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfeu03400
]
CFELI_08890 (fpg1)
Enzymes [BR:
cfeu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFELI_08890 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFELI_08890 (fpg1)
DNA repair and recombination proteins [BR:
cfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFELI_08890 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WJY95383
LinkDB
All DBs
Position
complement(1989966..1990862)
Genome browser
AA seq
298 aa
AA seq
DB search
MPELPEVEVVRRGLDTHVRGRRFASVDCLHPRAIRGLEGGEDQLKVLLVGQEVISLQRRG
KFLWLVLGKGDSASQSEVLGDGECLLVHLGMSGQMLIKDAAADADDPNFRHLRMRARLDD
GQQLWFVDQRTFGYWLPCELVQIATGVVPRTVTHIARDLLDPQLCLSTLARGIKAQRGEI
KKVLLNQEIVAGIGNIYADEMLFAATLHPRQPAHRISEKRLVELLRHGQDVMLRALEQGG
TSFDELYVNVNGQSGYFDLSLHAYGQHGRGCDRCGEILVREKFGNRSSHFCPACQRLY
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactcccagaagtagaagttgttcgccgcggcctggacactcatgtgcgtggc
cgtcgcttcgcatccgtcgactgcctgcacccgcgggcaatccgggggttggaaggtggt
gaggatcagctcaaggtgcttcttgtcggccaagaggttatcagtctgcagcgccgcggg
aagtttttgtggctggtgctgggcaagggggattcggcgtcgcaaagcgaagtgctcggt
gatggggaatgtttgctcgtgcatttggggatgagtgggcaaatgctgatcaaagatgcc
gcggctgatgcggatgacccgaattttcggcatctgcgcatgagggctcggctcgatgat
gggcagcagctgtggttcgttgatcagcgcacgttcggctactggttgccctgtgagctt
gtgcaaatcgcaaccggcgtggtgccgcgcacggtgacacatatcgcccgcgatctgctg
gatccacaactgtgcttatcgacgctcgcacgaggtatcaaagctcagcgcggtgagatt
aaaaaagtgttgctcaatcaggaaatcgtggccggtatcggcaatatttatgccgatgaa
atgctttttgccgccacgctgcacccacgccagccagcacacaggatcagtgaaaaacgc
ctcgttgaactgcttcgccacggccaggatgtgatgctgcgcgcgctggaacaaggcggt
accagcttcgatgagctttatgtgaatgtcaacgggcagtccggatattttgatctgtcc
ttgcatgcctacggccagcacgggcgcggttgcgatcgctgcggtgagattctagtgcgg
gaaaagtttgggaatcgttccagccatttctgtcctgcatgccagcgcctgtactaa
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