Campylobacter fetus subsp. fetus 82-40: CFF8240_0089
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Entry
CFF8240_0089 CDS
T00430
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cff
Campylobacter fetus subsp. fetus 82-40
Brite
KEGG Orthology (KO) [BR:
cff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cff03016
]
CFF8240_0089 (truD)
Enzymes [BR:
cff01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CFF8240_0089 (truD)
Transfer RNA biogenesis [BR:
cff03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFF8240_0089 (truD)
Prokaryotic type
CFF8240_0089 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SAM_BAF
Motif
Other DBs
NCBI-ProteinID:
ABK82361
UniProt:
A0RM66
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All DBs
Position
72745..73878
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AA seq
377 aa
AA seq
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MENTAIFKPLLGTTHSPINAHFSKNASDFVVRENPLYSFSGSGEHLVVEIQKKGMTTSEA
LTVLSRQSGAKMRDFGYAGLKDKEGMTTQFISMPAKFENEISKFSYENLKILSITKHNNK
IRIGHLKSNSFFIRLKKVLGSEALKLKEALKTIDKNGYPNYFGYQRFGRFGDNANSGFEI
LNSALNGDKSMFKKANPKLRDFLISAYQSDLFNKWLSKRVEISRFSEDFSARELEDIYKF
DKTTIKNLKSQKQFFKLFQGEVLGHYPFGKVFLCEDLEAEVAKFGARDRTSCGLIIGSKA
YESTGVAKSLEDEIFRDAYKFSSFVSGSRRFAWMWIDNLEYKYNEESAQFSISFALQKGS
YATVVLREILGRDIFEE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacagccatttttaaaccgcttttaggcactacgcattcgcctataaacgcg
cattttagtaaaaacgcaagtgattttgtagttagagaaaaccctctttatagttttagt
ggaagcggtgagcatctcgttgttgaaattcaaaaaaaaggtatgacgacttccgaagcc
cttactgttttaagcaggcaaagcggagcaaaaatgcgtgattttggttatgccgggctt
aaagataaagaggggatgacaacacaatttattagtatgccggctaaatttgaaaatgaa
atttcaaaattcagctacgaaaatttaaaaatcttaagtataacaaaacataataataaa
ataagaatcggtcacttaaaatcaaacagcttttttattcgtctcaaaaaagtcttagga
agtgaagctcttaaacttaaagaggctttaaaaactatcgataaaaacggctatccgaat
tatttcggttatcagaggttcggtagatttggagataatgcaaatagtggatttgaaatt
ttaaatagtgctttaaacggtgataaatcgatgtttaaaaaggcaaatccaaagttaaga
gattttttaatttcagcttatcagagcgatctttttaacaaatggctaagcaagagagtg
gaaattagccgttttagtgaagattttagcgccagggagcttgaagatatatataaattt
gataaaactactataaaaaatttaaaatcccaaaaacaattttttaagctttttcaaggc
gaagttttaggtcattatccttttggaaaggtgtttttatgcgaagatttagaagccgag
gttgctaaatttggagcaagagacagaacaagctgcggattgataatcggttctaaagcg
tatgaaagtacaggagttgcaaagagtttagaagatgaaatatttagagacgcttataaa
tttagttcttttgtaagcggttcaagacgatttgcttggatgtggattgataatttagaa
tataaatataatgaagaatccgcacagtttagcataagttttgcgctacaaaaaggttca
tatgcgactgttgttttgcgcgaaattttaggtagagatatttttgaagagtaa
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